Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF138Q8WVD3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF138Q8WVD3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF138Q8WVD3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF138Q8WVD3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.33■□□□□ 0.37
RNF138Q8WVD3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF138Q8WVD3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF138Q8WVD3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 TSPY17P-201ENST00000450329 467 ntBASIC17.32■□□□□ 0.36
RNF138Q8WVD3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 AC008622.2-201ENST00000617006 1229 ntBASIC17.32■□□□□ 0.36
RNF138Q8WVD3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 AC010653.2-201ENST00000623505 997 ntBASIC17.32■□□□□ 0.36
RNF138Q8WVD3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF138Q8WVD3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 INGX-201ENST00000359239 846 ntBASIC17.31■□□□□ 0.36
RNF138Q8WVD3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 AC007663.1-201ENST00000438948 1240 ntBASIC17.31■□□□□ 0.36
RNF138Q8WVD3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 CCR12P-201ENST00000446203 998 ntBASIC17.31■□□□□ 0.36
RNF138Q8WVD3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 AC116562.4-202ENST00000641738 218 ntBASIC17.31■□□□□ 0.36
RNF138Q8WVD3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF138Q8WVD3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF138Q8WVD3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms