Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 KRT18P16-201ENST00000510337 1294 ntBASIC28.56■■■□□ 2.16
CCER1Q8TC90 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC28.56■■■□□ 2.16
CCER1Q8TC90 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
CCER1Q8TC90 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.56■■■□□ 2.16
CCER1Q8TC90 AC060766.5-201ENST00000590539 871 ntBASIC28.56■■■□□ 2.16
CCER1Q8TC90 AC083880.1-201ENST00000608266 535 ntBASIC28.56■■■□□ 2.16
CCER1Q8TC90 PFKL-212ENST00000628044 129 ntTSL 3 BASIC28.56■■■□□ 2.16
CCER1Q8TC90 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
CCER1Q8TC90 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 ABHD17AP6-201ENST00000458502 1044 ntBASIC28.55■■■□□ 2.16
CCER1Q8TC90 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 AL138781.1-201ENST00000566567 1274 ntBASIC28.55■■■□□ 2.16
CCER1Q8TC90 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
CCER1Q8TC90 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCER1Q8TC90 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCER1Q8TC90 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CCER1Q8TC90 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
CCER1Q8TC90 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCER1Q8TC90 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.53■■■□□ 2.16
CCER1Q8TC90 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.53■■■□□ 2.16
CCER1Q8TC90 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SOX15-203ENST00000570788 1093 ntBASIC28.53■■■□□ 2.16
CCER1Q8TC90 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 AL512353.2-201ENST00000448759 1962 ntBASIC28.53■■■□□ 2.16
CCER1Q8TC90 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC28.53■■■□□ 2.16
CCER1Q8TC90 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCER1Q8TC90 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCER1Q8TC90 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC28.52■■■□□ 2.16
CCER1Q8TC90 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.16
CCER1Q8TC90 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CCER1Q8TC90 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CCER1Q8TC90 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms