Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 CA15P1-201ENST00000481698 905 ntBASIC20.61■□□□□ 0.89
BEST2Q8NFU1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 AC005363.2-201ENST00000618631 242 ntBASIC20.61■□□□□ 0.89
BEST2Q8NFU1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
BEST2Q8NFU1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST2Q8NFU1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 RN7SL850P-201ENST00000579959 291 ntBASIC20.59■□□□□ 0.89
BEST2Q8NFU1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 AC092865.7-201ENST00000641832 219 ntBASIC20.59■□□□□ 0.89
BEST2Q8NFU1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST2Q8NFU1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 AC113347.1-201ENST00000413321 391 ntBASIC20.58■□□□□ 0.89
BEST2Q8NFU1 ECEL1P2-202ENST00000465689 757 ntBASIC20.58■□□□□ 0.89
BEST2Q8NFU1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BEST2Q8NFU1 AC073508.3-201ENST00000619697 1419 ntBASIC20.58■□□□□ 0.88
BEST2Q8NFU1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BEST2Q8NFU1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 TMPOP1-202ENST00000424642 1267 ntBASIC20.57■□□□□ 0.88
BEST2Q8NFU1 SLC25A3P1-201ENST00000443844 931 ntBASIC20.57■□□□□ 0.88
BEST2Q8NFU1 TSPY17P-201ENST00000450329 467 ntBASIC20.57■□□□□ 0.88
BEST2Q8NFU1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
BEST2Q8NFU1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms