Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC116Q8IYX3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 NIFKP9-201ENST00000419265 221 ntBASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 AL158047.1-201ENST00000445918 881 ntBASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 AC098590.1-201ENST00000468126 897 ntBASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 RPS2P4-201ENST00000476944 856 ntBASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC116Q8IYX3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 AL445675.2-201ENST00000620291 557 ntBASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC116Q8IYX3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC116Q8IYX3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC116Q8IYX3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC116Q8IYX3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC116Q8IYX3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC116Q8IYX3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC116Q8IYX3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms