Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RP1L1Q8IWN7 UNC93B7-201ENST00000509439 705 ntBASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 PHGDH-210ENST00000641115 1638 ntBASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RP1L1Q8IWN7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 KRT8P41-201ENST00000533985 1514 ntBASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RP1L1Q8IWN7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 FAAHP1-202ENST00000446499 1238 ntBASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 NPAP1P7-201ENST00000613027 823 ntBASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 FEM1AP1-201ENST00000431297 1995 ntBASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RP1L1Q8IWN7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms