Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BICD1-207ENST00000551848 1962 ntBASIC17.02■□□□□ 0.32
LRRC28Q86X40 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 TSPY20P-201ENST00000450910 630 ntBASIC17.02■□□□□ 0.32
LRRC28Q86X40 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC28Q86X40 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.02■□□□□ 0.32
LRRC28Q86X40 HLA-B-256ENST00000639848 1089 ntBASIC17.02■□□□□ 0.32
LRRC28Q86X40 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC28Q86X40 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 KRT16P6-202ENST00000425692 1426 ntBASIC17.02■□□□□ 0.31
LRRC28Q86X40 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC28Q86X40 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 NOC2LP1-202ENST00000452600 2235 ntBASIC17.01■□□□□ 0.31
LRRC28Q86X40 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 ABHD17AP1-201ENST00000358206 933 ntBASIC17.01■□□□□ 0.31
LRRC28Q86X40 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC28Q86X40 AL354751.1-201ENST00000412768 1863 ntBASIC17.01■□□□□ 0.31
LRRC28Q86X40 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC28Q86X40 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 AP000997.3-201ENST00000623333 2250 ntBASIC17■□□□□ 0.31
LRRC28Q86X40 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 AL031598.1-201ENST00000561511 1773 ntBASIC17■□□□□ 0.31
LRRC28Q86X40 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 FAM201B-201ENST00000458407 597 ntBASIC17■□□□□ 0.31
LRRC28Q86X40 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 MIR4651-201ENST00000582622 73 ntBASIC17■□□□□ 0.31
LRRC28Q86X40 AC060766.5-201ENST00000590539 871 ntBASIC17■□□□□ 0.31
LRRC28Q86X40 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17■□□□□ 0.31
LRRC28Q86X40 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17■□□□□ 0.31
LRRC28Q86X40 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC28Q86X40 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRC28Q86X40 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRC28Q86X40 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRC28Q86X40 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms