Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 ANO7L1-203ENST00000602586 1720 ntBASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 PCDHB18P-201ENST00000524813 2368 ntBASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 MIR6821-201ENST00000617625 74 ntBASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 KRT8P8-201ENST00000434750 1448 ntBASIC16.62■□□□□ 0.25
LRRTM1Q86UE6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 AC005829.2-201ENST00000571422 1056 ntBASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRTM1Q86UE6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 AL390719.1-204ENST00000412397 1219 ntBASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 AC083906.6-201ENST00000641366 219 ntBASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 AC124283.5-201ENST00000624661 1809 ntBASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRTM1Q86UE6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRTM1Q86UE6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms