Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.91■□□□□ 0.14
ZNF546Q86UE3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
ZNF546Q86UE3 KRT87P-202ENST00000534226 1464 ntBASIC15.91■□□□□ 0.14
ZNF546Q86UE3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AC124067.4-201ENST00000519691 2379 ntBASIC15.9■□□□□ 0.14
ZNF546Q86UE3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AC012414.1-201ENST00000556676 535 ntBASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 KRT8P17-201ENST00000453110 1448 ntBASIC15.9■□□□□ 0.14
ZNF546Q86UE3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ZNF546Q86UE3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 TNRC18P3-201ENST00000441896 2691 ntBASIC15.89■□□□□ 0.13
ZNF546Q86UE3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.89■□□□□ 0.13
ZNF546Q86UE3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ZNF546Q86UE3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms