Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 MESTP1-201ENST00000404287 994 ntBASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 AL355355.2-201ENST00000442321 338 ntBASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 MIR6786-201ENST00000616843 113 ntBASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYSMD3Q7Z3D4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 TEX21P-204ENST00000641479 1693 ntBASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD3Q7Z3D4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AC004951.3-201ENST00000418645 1148 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AC008040.2-201ENST00000461049 708 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AC091390.4-202ENST00000476426 537 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AP003071.4-201ENST00000562276 1284 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 MIR4785-201ENST00000585005 73 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 AC011298.2-201ENST00000617989 482 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 REXO1L12P-201ENST00000622156 912 ntBASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD3Q7Z3D4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 AC116562.2-201ENST00000507042 360 ntBASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LYSMD3Q7Z3D4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD3Q7Z3D4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms