Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HIST2H3AQ71DI3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.83■□□□□ 0.28
HIST2H3AQ71DI3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST2H3AQ71DI3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HIST2H3AQ71DI3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 TNXA-203ENST00000507684 2038 ntBASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HIST2H3AQ71DI3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H3AQ71DI3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 FP475955.4-201ENST00000623131 1990 ntBASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H3AQ71DI3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms