Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 NOC2LP2-201ENST00000407594 1944 ntBASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 GPX1P1-201ENST00000388829 606 ntBASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AC016769.1-201ENST00000409132 1010 ntBASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AC011767.1-201ENST00000617410 1153 ntBASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 BCL2-203ENST00000589955 5011 ntBASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 FEM1AP3-201ENST00000403722 1741 ntBASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00242Q5T6M2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00242Q5T6M2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 AL390719.1-204ENST00000412397 1219 ntBASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 AL512625.2-201ENST00000417533 625 ntBASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 AC231657.2-201ENST00000624556 255 ntBASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00242Q5T6M2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms