Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 BICD1-207ENST00000551848 1962 ntBASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.09■□□□□ 0.49
RUNDC3AQ59EK9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RUNDC3AQ59EK9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 AC092118.2-201ENST00000613495 667 ntBASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RUNDC3AQ59EK9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 AC026471.1-201ENST00000564629 3026 ntBASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 CROCCP5-201ENST00000436658 830 ntBASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
RUNDC3AQ59EK9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 LETM1P2-201ENST00000597330 2178 ntBASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 TUBB8P6-201ENST00000436895 1288 ntBASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RUNDC3AQ59EK9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms