Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 AC098590.1-201ENST00000468126 897 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 RPS2P52-201ENST00000469610 820 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 AL121829.2-201ENST00000620908 328 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 AL121906.2-201ENST00000621597 723 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 KRT16P6-202ENST00000425692 1426 ntBASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCGF3Q3KNV8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 AL158047.1-201ENST00000445918 881 ntBASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 C1QBPP2-201ENST00000528754 825 ntBASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 MTDHP1-201ENST00000605323 784 ntBASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 FAM197Y4-202ENST00000622692 608 ntBASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.94■□□□□ 0.3
PCGF3Q3KNV8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 UBE2SP1-201ENST00000450587 669 ntBASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 RPPH1-201ENST00000516869 333 ntBASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCGF3Q3KNV8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 AC239809.2-201ENST00000415381 517 ntBASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 AC233263.1-201ENST00000578059 224 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms