Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PSMD4P55036 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PSMD4P55036 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.82■□□□□ 0.44
PSMD4P55036 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.82■□□□□ 0.44
PSMD4P55036 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 KSR1P1-201ENST00000446298 240 ntBASIC17.82■□□□□ 0.44
PSMD4P55036 AC098590.1-201ENST00000468126 897 ntBASIC17.82■□□□□ 0.44
PSMD4P55036 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PSMD4P55036 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PSMD4P55036 AP001412.1-201ENST00000608405 714 ntBASIC17.82■□□□□ 0.44
PSMD4P55036 AL445675.2-201ENST00000620291 557 ntBASIC17.82■□□□□ 0.44
PSMD4P55036 HLA-A-209ENST00000638375 975 ntBASIC17.82■□□□□ 0.44
PSMD4P55036 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.82■□□□□ 0.44
PSMD4P55036 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PSMD4P55036 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.81■□□□□ 0.44
PSMD4P55036 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.81■□□□□ 0.44
PSMD4P55036 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 AC131212.4-201ENST00000623606 975 ntBASIC17.81■□□□□ 0.44
PSMD4P55036 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.81■□□□□ 0.44
PSMD4P55036 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.81■□□□□ 0.44
PSMD4P55036 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PSMD4P55036 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PSMD4P55036 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PSMD4P55036 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PSMD4P55036 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.8■□□□□ 0.44
PSMD4P55036 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.8■□□□□ 0.44
PSMD4P55036 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.8■□□□□ 0.44
PSMD4P55036 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.8■□□□□ 0.44
PSMD4P55036 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.8■□□□□ 0.44
PSMD4P55036 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.8■□□□□ 0.44
PSMD4P55036 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.8■□□□□ 0.44
PSMD4P55036 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.8■□□□□ 0.44
PSMD4P55036 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PSMD4P55036 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PSMD4P55036 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PSMD4P55036 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PSMD4P55036 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PSMD4P55036 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PSMD4P55036 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSMD4P55036 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSMD4P55036 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSMD4P55036 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.79■□□□□ 0.44
PSMD4P55036 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSMD4P55036 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.79■□□□□ 0.44
PSMD4P55036 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PSMD4P55036 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms