Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
POLR2JP52435 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 MIR663A-201ENST00000385250 93 ntBASIC18.32■□□□□ 0.52
POLR2JP52435 MIPEPP3-201ENST00000412105 444 ntBASIC18.32■□□□□ 0.52
POLR2JP52435 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR2JP52435 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 CDCA4P2-201ENST00000441182 718 ntBASIC18.32■□□□□ 0.52
POLR2JP52435 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR2JP52435 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
POLR2JP52435 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.32■□□□□ 0.52
POLR2JP52435 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR2JP52435 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR2JP52435 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.32■□□□□ 0.52
POLR2JP52435 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR2JP52435 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
POLR2JP52435 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 AC026471.1-201ENST00000564629 3026 ntBASIC18.31■□□□□ 0.52
POLR2JP52435 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.31■□□□□ 0.52
POLR2JP52435 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.31■□□□□ 0.52
POLR2JP52435 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
POLR2JP52435 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
POLR2JP52435 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
POLR2JP52435 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 AC026185.1-201ENST00000445748 174 ntBASIC18.3■□□□□ 0.52
POLR2JP52435 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.3■□□□□ 0.52
POLR2JP52435 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 AC092437.1-201ENST00000624794 1048 ntBASIC18.3■□□□□ 0.52
POLR2JP52435 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
POLR2JP52435 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
POLR2JP52435 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
POLR2JP52435 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
POLR2JP52435 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
POLR2JP52435 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.29■□□□□ 0.52
POLR2JP52435 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms