Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB5CP51148 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.41■□□□□ 0.06
RAB5CP51148 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RAB5CP51148 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB5CP51148 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB5CP51148 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB5CP51148 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB5CP51148 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB5CP51148 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB5CP51148 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB5CP51148 GNAS-203ENST00000306120 1878 ntBASIC15.4■□□□□ 0.06
RAB5CP51148 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB5CP51148 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB5CP51148 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB5CP51148 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB5CP51148 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB5CP51148 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB5CP51148 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.4■□□□□ 0.06
RAB5CP51148 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 IRX1P1-201ENST00000438849 1838 ntBASIC15.4■□□□□ 0.06
RAB5CP51148 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB5CP51148 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB5CP51148 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB5CP51148 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB5CP51148 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.39■□□□□ 0.05
RAB5CP51148 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB5CP51148 AL358852.1-201ENST00000623174 1268 ntBASIC15.39■□□□□ 0.05
RAB5CP51148 AC105233.4-201ENST00000642045 216 ntBASIC15.39■□□□□ 0.05
RAB5CP51148 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB5CP51148 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB5CP51148 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RAB5CP51148 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB5CP51148 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB5CP51148 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB5CP51148 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB5CP51148 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB5CP51148 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB5CP51148 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB5CP51148 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
RAB5CP51148 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB5CP51148 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB5CP51148 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB5CP51148 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB5CP51148 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms