Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLK2P49760 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.73■■□□□ 1.07
CLK2P49760 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.73■■□□□ 1.07
CLK2P49760 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.73■■□□□ 1.07
CLK2P49760 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CLK2P49760 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CLK2P49760 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CLK2P49760 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.73■■□□□ 1.07
CLK2P49760 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLK2P49760 LINC01568-207ENST00000641790 1380 ntBASIC21.73■■□□□ 1.07
CLK2P49760 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLK2P49760 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLK2P49760 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLK2P49760 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.72■■□□□ 1.07
CLK2P49760 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.72■■□□□ 1.07
CLK2P49760 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLK2P49760 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.72■■□□□ 1.07
CLK2P49760 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
CLK2P49760 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLK2P49760 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.72■■□□□ 1.07
CLK2P49760 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CLK2P49760 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.72■■□□□ 1.07
CLK2P49760 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CLK2P49760 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.72■■□□□ 1.07
CLK2P49760 FP475955.4-201ENST00000623131 1990 ntBASIC21.72■■□□□ 1.07
CLK2P49760 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.72■■□□□ 1.07
CLK2P49760 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CLK2P49760 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 PKD1P6-201ENST00000343738 4769 ntBASIC21.71■■□□□ 1.07
CLK2P49760 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.71■■□□□ 1.07
CLK2P49760 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLK2P49760 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.71■■□□□ 1.07
CLK2P49760 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.71■■□□□ 1.07
CLK2P49760 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.71■■□□□ 1.07
CLK2P49760 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.71■■□□□ 1.07
CLK2P49760 AL353719.1-201ENST00000566847 864 ntBASIC21.71■■□□□ 1.07
CLK2P49760 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.71■■□□□ 1.07
CLK2P49760 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.71■■□□□ 1.07
CLK2P49760 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLK2P49760 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.71■■□□□ 1.07
CLK2P49760 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.7■■□□□ 1.07
CLK2P49760 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLK2P49760 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.7■■□□□ 1.06
CLK2P49760 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLK2P49760 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.7■■□□□ 1.06
CLK2P49760 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLK2P49760 AC007663.1-201ENST00000438948 1240 ntBASIC21.7■■□□□ 1.06
CLK2P49760 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.7■■□□□ 1.06
CLK2P49760 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLK2P49760 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.7■■□□□ 1.06
CLK2P49760 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 FAM87A-204ENST00000613235 858 ntBASIC21.7■■□□□ 1.06
CLK2P49760 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.7■■□□□ 1.06
CLK2P49760 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLK2P49760 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.69■■□□□ 1.06
CLK2P49760 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.69■■□□□ 1.06
CLK2P49760 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.69■■□□□ 1.06
CLK2P49760 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.69■■□□□ 1.06
CLK2P49760 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.69■■□□□ 1.06
CLK2P49760 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLK2P49760 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.68■■□□□ 1.06
CLK2P49760 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLK2P49760 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLK2P49760 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLK2P49760 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLK2P49760 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLK2P49760 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLK2P49760 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms