Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBE2AP49459 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
UBE2AP49459 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
UBE2AP49459 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.14□□□□□ -0.47
UBE2AP49459 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2AP49459 NCF1B-203ENST00000435988 1254 ntBASIC12.14□□□□□ -0.47
UBE2AP49459 TSPY6P-201ENST00000448518 926 ntBASIC12.14□□□□□ -0.47
UBE2AP49459 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.14□□□□□ -0.47
UBE2AP49459 AC091874.3-201ENST00000512672 1195 ntBASIC12.14□□□□□ -0.47
UBE2AP49459 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2AP49459 AL138781.1-201ENST00000566567 1274 ntBASIC12.14□□□□□ -0.47
UBE2AP49459 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.14□□□□□ -0.47
UBE2AP49459 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
UBE2AP49459 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.14□□□□□ -0.47
UBE2AP49459 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBE2AP49459 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.14□□□□□ -0.47
UBE2AP49459 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBE2AP49459 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
UBE2AP49459 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 BX323043.1-201ENST00000641006 1765 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2AP49459 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 AL109923.1-201ENST00000618799 583 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 AL121906.2-201ENST00000621597 723 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.13□□□□□ -0.47
UBE2AP49459 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.13□□□□□ -0.47
UBE2AP49459 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 AC116351.2-201ENST00000606540 1585 ntBASIC12.13□□□□□ -0.47
UBE2AP49459 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.13□□□□□ -0.47
UBE2AP49459 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
UBE2AP49459 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBE2AP49459 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.12□□□□□ -0.47
UBE2AP49459 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.12□□□□□ -0.47
UBE2AP49459 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBE2AP49459 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms