Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PCP4P48539 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.26□□□□□ -0.29
PCP4P48539 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PCP4P48539 CICP20-201ENST00000443330 2801 ntBASIC13.26□□□□□ -0.29
PCP4P48539 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.26□□□□□ -0.29
PCP4P48539 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CROCCP3-202ENST00000420820 1947 ntBASIC13.25□□□□□ -0.29
PCP4P48539 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 CICP24-201ENST00000605464 2705 ntBASIC13.25□□□□□ -0.29
PCP4P48539 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
PCP4P48539 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.25□□□□□ -0.29
PCP4P48539 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PCP4P48539 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCP4P48539 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 AC106881.1-201ENST00000605849 3329 ntBASIC13.24□□□□□ -0.29
PCP4P48539 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.24□□□□□ -0.29
PCP4P48539 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PCP4P48539 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
PCP4P48539 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
PCP4P48539 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCP4P48539 AL645608.8-201ENST00000606034 2086 ntBASIC13.24□□□□□ -0.29
PCP4P48539 PTENP1-202ENST00000532280 3996 ntBASIC13.23□□□□□ -0.29
PCP4P48539 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PCP4P48539 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms