Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCC3P46736 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCC3P46736 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCC3P46736 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BRCC3P46736 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
BRCC3P46736 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BRCC3P46736 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
BRCC3P46736 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
BRCC3P46736 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 COX11P1-201ENST00000489116 835 ntBASIC20.4■□□□□ 0.86
BRCC3P46736 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 AC022616.7-201ENST00000525383 220 ntBASIC20.4■□□□□ 0.86
BRCC3P46736 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.4■□□□□ 0.86
BRCC3P46736 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BRCC3P46736 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
BRCC3P46736 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
BRCC3P46736 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BRCC3P46736 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BRCC3P46736 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.39■□□□□ 0.86
BRCC3P46736 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.39■□□□□ 0.86
BRCC3P46736 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.39■□□□□ 0.85
BRCC3P46736 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 AC063952.2-201ENST00000498792 1227 ntBASIC20.39■□□□□ 0.85
BRCC3P46736 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.39■□□□□ 0.85
BRCC3P46736 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.39■□□□□ 0.85
BRCC3P46736 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.39■□□□□ 0.85
BRCC3P46736 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BRCC3P46736 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.38■□□□□ 0.85
BRCC3P46736 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
BRCC3P46736 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
BRCC3P46736 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.38■□□□□ 0.85
BRCC3P46736 AC087388.1-201ENST00000571370 1112 ntBASIC20.38■□□□□ 0.85
BRCC3P46736 MIR4674-201ENST00000582457 87 ntBASIC20.38■□□□□ 0.85
BRCC3P46736 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 AC011558.1-201ENST00000623459 338 ntBASIC20.38■□□□□ 0.85
BRCC3P46736 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BRCC3P46736 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BRCC3P46736 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.37■□□□□ 0.85
BRCC3P46736 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
BRCC3P46736 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.37■□□□□ 0.85
BRCC3P46736 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.37■□□□□ 0.85
BRCC3P46736 RNF152P1-201ENST00000397754 604 ntBASIC20.37■□□□□ 0.85
BRCC3P46736 TSPY21P-201ENST00000433481 731 ntBASIC20.37■□□□□ 0.85
BRCC3P46736 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.37■□□□□ 0.85
BRCC3P46736 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms