Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.271e-6■■■■□ 19.4
MATR3P43243 PRH1-202ENST00000536086 554 ntTSL 54.75□□□□□ -1.651e-6■■■■□ 19.4
MATR3P43243 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.338e-7■■■■□ 19.4
MATR3P43243 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.338e-7■■■■□ 19.4
MATR3P43243 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.168e-7■■■■□ 19.4
MATR3P43243 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.031e-6■■■■□ 19.4
MATR3P43243 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.585e-6■■■■□ 19.4
MATR3P43243 FBXW4-202ENST00000457105 630 ntTSL 519.24■□□□□ 0.675e-6■■■■□ 19.4
MATR3P43243 ACBD6-204ENST00000475338 964 ntTSL 511.35□□□□□ -0.592e-6■■■■□ 19.4
MATR3P43243 ACBD6-205ENST00000496993 672 ntTSL 56.86□□□□□ -1.312e-6■■■■□ 19.4
MATR3P43243 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.56■■□□□ 1.042e-7■■■■□ 19.4
MATR3P43243 SSR1-205ENST00000475213 446 ntTSL 313.38□□□□□ -0.272e-7■■■■□ 19.4
MATR3P43243 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.032e-7■■■■□ 19.4
MATR3P43243 MAPK6-203ENST00000558100 514 ntTSL 214.51□□□□□ -0.099e-7■■■■□ 19.4
MATR3P43243 MAPK6-207ENST00000560774 574 ntTSL 413.76□□□□□ -0.219e-7■■■■□ 19.4
MATR3P43243 MAPK6-204ENST00000558841 656 ntTSL 29.91□□□□□ -0.829e-7■■■■□ 19.4
MATR3P43243 MAPK6-208ENST00000560802 552 ntTSL 47.09□□□□□ -1.279e-7■■■■□ 19.4
MATR3P43243 MAPK6-205ENST00000558891 583 ntTSL 34.98□□□□□ -1.619e-7■■■■□ 19.4
MATR3P43243 MAPK6-202ENST00000558063 583 ntTSL 43.34□□□□□ -1.879e-7■■■■□ 19.4
MATR3P43243 MAPK6-206ENST00000560254 574 ntTSL 43.26□□□□□ -1.899e-7■■■■□ 19.4
MATR3P43243 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.669e-7■■■■□ 19.4
MATR3P43243 TARBP1-203ENST00000463793 391 ntTSL 34.31□□□□□ -1.724e-6■■■■□ 19.4
MATR3P43243 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.78■□□□□ 0.62e-6■■■■□ 19.4
MATR3P43243 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8□□□□□ -1.132e-6■■■■□ 19.4
MATR3P43243 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.08□□□□□ -1.62e-6■■■■□ 19.4
MATR3P43243 NUTM2B-AS1-210ENST00000600376 510 ntTSL 34.72□□□□□ -1.652e-6■■■■□ 19.4
MATR3P43243 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.045e-7■■■■□ 19.4
MATR3P43243 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.04■□□□□ -01e-9■■■■□ 19.4
MATR3P43243 PGM3-205ENST00000506587 1971 ntTSL 2 BASIC11.03□□□□□ -0.641e-9■■■■□ 19.4
MATR3P43243 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.051e-9■■■■□ 19.4
MATR3P43243 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.16□□□□□ -1.261e-9■■■■□ 19.4
MATR3P43243 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.34□□□□□ -1.391e-9■■■■□ 19.4
MATR3P43243 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.218e-10■■■■□ 19.4
MATR3P43243 MAGI1-208ENST00000472257 3045 ntTSL 516.62■□□□□ 0.258e-10■■■■□ 19.4
MATR3P43243 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.04■□□□□ 0.168e-7■■■■□ 19.4
MATR3P43243 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.63■□□□□ 0.098e-7■■■■□ 19.4
MATR3P43243 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.57■□□□□ 0.088e-7■■■■□ 19.4
MATR3P43243 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.038e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.84□□□□□ -0.038e-10■■■■□ 19.4
MATR3P43243 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC14.26□□□□□ -0.139e-7■■■■□ 19.4
MATR3P43243 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC14.12□□□□□ -0.158e-10■■■■□ 19.4
MATR3P43243 INSR-203ENST00000593970 419 ntTSL 213.42□□□□□ -0.268e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-216ENST00000498525 777 ntTSL 513.3□□□□□ -0.288e-10■■■■□ 19.4
MATR3P43243 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.359e-7■■■■□ 19.4
MATR3P43243 CDK5RAP1-207ENST00000461710 2650 ntTSL 212.8□□□□□ -0.368e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC12.72□□□□□ -0.378e-10■■■■□ 19.4
MATR3P43243 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.688e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-204ENST00000427097 974 ntTSL 59.53□□□□□ -0.888e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-212ENST00000481964 945 ntTSL 59.32□□□□□ -0.928e-10■■■■□ 19.4
MATR3P43243 CDK5RAP1-213ENST00000482967 840 ntTSL 39.32□□□□□ -0.928e-10■■■■□ 19.4
MATR3P43243 DUSP16-203ENST00000536236 258 ntTSL 37.08□□□□□ -1.289e-7■■■■□ 19.4
MATR3P43243 DUSP16-204ENST00000539940 566 ntTSL 46.03□□□□□ -1.449e-7■■■■□ 19.4
MATR3P43243 DUSP16-205ENST00000541207 585 ntTSL 45.91□□□□□ -1.469e-7■■■■□ 19.4
MATR3P43243 PIP5K1B-207ENST00000478500 3335 ntTSL 1 (best)5.33□□□□□ -1.562e-6■■■■□ 19.4
MATR3P43243 MAGI1-214ENST00000494271 588 ntTSL 54.08□□□□□ -1.768e-10■■■■□ 19.4
MATR3P43243 PRR4-214ENST00000546317 281 ntTSL 54.11□□□□□ -1.759e-7■■■■□ 19.4
MATR3P43243 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.119e-7■■■■□ 19.4
MATR3P43243 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.039e-7■■■■□ 19.4
MATR3P43243 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.249e-7■■■■□ 19.4
MATR3P43243 NSD2-202ENST00000353275 7980 ntTSL 1 (best)13.14□□□□□ -0.319e-7■■■■□ 19.4
MATR3P43243 NSD2-220ENST00000509115 1212 ntTSL 213.12□□□□□ -0.319e-7■■■■□ 19.4
MATR3P43243 NSD2-222ENST00000512700 1095 ntTSL 513.12□□□□□ -0.319e-7■■■■□ 19.4
MATR3P43243 NSD2-201ENST00000312087 8050 ntTSL 1 (best)12.09□□□□□ -0.479e-7■■■■□ 19.4
MATR3P43243 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC12.07□□□□□ -0.489e-7■■■■□ 19.4
MATR3P43243 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC10.44□□□□□ -0.749e-7■■■■□ 19.4
MATR3P43243 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC9.36□□□□□ -0.919e-7■■■■□ 19.4
MATR3P43243 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.32■■□□□ 1.967e-7■■■■□ 19.4
MATR3P43243 KIF13A-211ENST00000507576 529 ntTSL 324.2■■□□□ 1.467e-7■■■■□ 19.4
MATR3P43243 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.087e-7■■■■□ 19.4
MATR3P43243 SMYD3-203ENST00000391836 732 ntTSL 512.27□□□□□ -0.451e-6■■■■□ 19.4
MATR3P43243 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.567e-7■■■■□ 19.4
MATR3P43243 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.677e-7■■■■□ 19.4
MATR3P43243 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.717e-7■■■■□ 19.4
MATR3P43243 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.057e-7■■■■□ 19.4
MATR3P43243 KIF13A-209ENST00000505588 212 ntTSL 52.98□□□□□ -1.937e-7■■■■□ 19.4
MATR3P43243 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.294e-7■■■■□ 19.4
MATR3P43243 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.18■□□□□ 0.184e-7■■■■□ 19.4
MATR3P43243 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.62□□□□□ -0.874e-7■■■■□ 19.4
MATR3P43243 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.95□□□□□ -1.944e-7■■■■□ 19.4
MATR3P43243 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.66■■□□□ 1.221e-6■■■■□ 19.4
MATR3P43243 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.591e-6■■■■□ 19.4
MATR3P43243 ZNF644-211ENST00000498303 514 ntTSL 1 (best)15.56■□□□□ 0.081e-6■■■■□ 19.4
MATR3P43243 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC10.35□□□□□ -0.751e-6■■■■□ 19.4
MATR3P43243 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.241e-6■■■■□ 19.4
MATR3P43243 ZNF644-205ENST00000467231 851 ntTSL 32.23□□□□□ -2.051e-6■■■■□ 19.4
MATR3P43243 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.231e-7■■■■□ 19.4
MATR3P43243 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.121e-7■■■■□ 19.4
MATR3P43243 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.341e-7■■■■□ 19.4
MATR3P43243 FHIT-206ENST00000488467 601 ntTSL 312.21□□□□□ -0.451e-7■■■■□ 19.4
MATR3P43243 TEX10-201ENST00000374902 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.543e-6■■■■□ 19.4
MATR3P43243 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC11.03□□□□□ -0.643e-6■■■■□ 19.4
MATR3P43243 TEX10-202ENST00000429235 824 ntTSL 56.2□□□□□ -1.423e-6■■■■□ 19.4
MATR3P43243 EVA1A-211ENST00000490746 589 ntTSL 519.23■□□□□ 0.674e-7■■■■□ 19.4
MATR3P43243 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.544e-7■■■■□ 19.4
MATR3P43243 EVA1A-208ENST00000485891 479 ntTSL 518.01■□□□□ 0.474e-7■■■■□ 19.4
MATR3P43243 EVA1A-206ENST00000432649 569 ntAPPRIS ALT2 TSL 317.08■□□□□ 0.324e-7■■■■□ 19.4
MATR3P43243 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.154e-7■■■■□ 19.4
MATR3P43243 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.084e-7■■■■□ 19.4
MATR3P43243 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.134e-7■■■■□ 19.4
MATR3P43243 EVA1A-210ENST00000486696 585 ntTSL 37.57□□□□□ -1.24e-7■■■■□ 19.4
Retrieved 100 of 16,209 protein–RNA pairs in 137.4 ms