Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.67■□□□□ 0.26
GDNFP39905 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 CYP2T3P-201ENST00000601990 817 ntBASIC16.67■□□□□ 0.26
GDNFP39905 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
GDNFP39905 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.66■□□□□ 0.26
GDNFP39905 KRT17P1-201ENST00000399211 1546 ntBASIC16.66■□□□□ 0.26
GDNFP39905 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.66■□□□□ 0.26
GDNFP39905 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GDNFP39905 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GDNFP39905 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.66■□□□□ 0.26
GDNFP39905 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.66■□□□□ 0.26
GDNFP39905 AC105036.2-201ENST00000569468 176 ntBASIC16.66■□□□□ 0.26
GDNFP39905 AC133552.2-202ENST00000575694 574 ntBASIC16.66■□□□□ 0.26
GDNFP39905 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
GDNFP39905 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GDNFP39905 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.66■□□□□ 0.26
GDNFP39905 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 FP475955.4-201ENST00000623131 1990 ntBASIC16.66■□□□□ 0.26
GDNFP39905 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDNFP39905 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 KRT18P68-201ENST00000392293 1000 ntBASIC16.65■□□□□ 0.26
GDNFP39905 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.65■□□□□ 0.26
GDNFP39905 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
GDNFP39905 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
GDNFP39905 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDNFP39905 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GDNFP39905 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
GDNFP39905 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GDNFP39905 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms