Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EPHA3P29320 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
EPHA3P29320 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EPHA3P29320 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 LTB4R2-202ENST00000528054 3092 ntBASIC18.63■□□□□ 0.57
EPHA3P29320 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EPHA3P29320 AL354751.1-201ENST00000412768 1863 ntBASIC18.63■□□□□ 0.57
EPHA3P29320 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 AC073210.2-201ENST00000430369 194 ntBASIC18.63■□□□□ 0.57
EPHA3P29320 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.63■□□□□ 0.57
EPHA3P29320 AC005829.2-201ENST00000571422 1056 ntBASIC18.63■□□□□ 0.57
EPHA3P29320 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EPHA3P29320 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.63■□□□□ 0.57
EPHA3P29320 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.62■□□□□ 0.57
EPHA3P29320 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.62■□□□□ 0.57
EPHA3P29320 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EPHA3P29320 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EPHA3P29320 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHA3P29320 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHA3P29320 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 AC004911.1-201ENST00000416316 871 ntBASIC18.61■□□□□ 0.57
EPHA3P29320 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.61■□□□□ 0.57
EPHA3P29320 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.61■□□□□ 0.57
EPHA3P29320 AC133552.2-202ENST00000575694 574 ntBASIC18.61■□□□□ 0.57
EPHA3P29320 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHA3P29320 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.61■□□□□ 0.57
EPHA3P29320 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
EPHA3P29320 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EPHA3P29320 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
EPHA3P29320 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPHA3P29320 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHA3P29320 KRT8P8-201ENST00000434750 1448 ntBASIC18.6■□□□□ 0.57
EPHA3P29320 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPHA3P29320 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms