Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CHMP24386 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP24386 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHMP24386 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMP24386 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP24386 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP24386 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHMP24386 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP24386 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CHMP24386 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CHMP24386 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP24386 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP24386 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP24386 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP24386 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP24386 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP24386 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CHMP24386 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP24386 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.88■□□□□ 0.45
CHMP24386 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP24386 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CHMP24386 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP24386 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP24386 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHMP24386 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP24386 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 AC116351.2-201ENST00000606540 1585 ntBASIC17.87■□□□□ 0.45
CHMP24386 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 RPS2P4-201ENST00000476944 856 ntBASIC17.87■□□□□ 0.45
CHMP24386 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.87■□□□□ 0.45
CHMP24386 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP24386 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP24386 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMP24386 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP24386 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP24386 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP24386 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP24386 AC005082.1-201ENST00000413042 2259 ntBASIC17.86■□□□□ 0.45
CHMP24386 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 AC008550.1-201ENST00000511500 884 ntBASIC17.86■□□□□ 0.45
CHMP24386 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP24386 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP24386 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP24386 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP24386 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.86■□□□□ 0.45
CHMP24386 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP24386 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP24386 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms