Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKB1P19838 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 FP475955.4-201ENST00000623131 1990 ntBASIC19.48■□□□□ 0.71
NFKB1P19838 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.48■□□□□ 0.71
NFKB1P19838 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.48■□□□□ 0.71
NFKB1P19838 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 AC142381.4-202ENST00000563973 229 ntBASIC19.48■□□□□ 0.71
NFKB1P19838 AL353708.3-201ENST00000610272 989 ntBASIC19.48■□□□□ 0.71
NFKB1P19838 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKB1P19838 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKB1P19838 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
NFKB1P19838 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NFKB1P19838 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKB1P19838 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKB1P19838 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NFKB1P19838 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NFKB1P19838 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.47■□□□□ 0.71
NFKB1P19838 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.47■□□□□ 0.71
NFKB1P19838 AC004980.1-204ENST00000429707 299 ntBASIC19.47■□□□□ 0.71
NFKB1P19838 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKB1P19838 RARRES2P10-201ENST00000564312 460 ntBASIC19.47■□□□□ 0.71
NFKB1P19838 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.47■□□□□ 0.71
NFKB1P19838 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKB1P19838 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKB1P19838 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NFKB1P19838 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NFKB1P19838 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NFKB1P19838 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 AC004408.2-201ENST00000623613 2777 ntBASIC19.46■□□□□ 0.71
NFKB1P19838 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKB1P19838 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 TSPY23P-201ENST00000440136 739 ntBASIC19.46■□□□□ 0.71
NFKB1P19838 AL158047.1-201ENST00000445918 881 ntBASIC19.46■□□□□ 0.71
NFKB1P19838 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKB1P19838 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NFKB1P19838 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKB1P19838 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKB1P19838 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
NFKB1P19838 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NFKB1P19838 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NFKB1P19838 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms