Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.27■□□□□ 0.68
CTPS1P17812 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS1P17812 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS1P17812 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.27■□□□□ 0.68
CTPS1P17812 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS1P17812 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS1P17812 AC079598.2-202ENST00000546624 1451 ntBASIC19.27■□□□□ 0.67
CTPS1P17812 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS1P17812 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS1P17812 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.26■□□□□ 0.67
CTPS1P17812 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTPS1P17812 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 UNC93B2-201ENST00000285383 730 ntBASIC19.26■□□□□ 0.67
CTPS1P17812 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 AL390955.1-201ENST00000428694 934 ntBASIC19.26■□□□□ 0.67
CTPS1P17812 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.26■□□□□ 0.67
CTPS1P17812 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.26■□□□□ 0.67
CTPS1P17812 SLC25A1P4-201ENST00000567977 778 ntBASIC19.26■□□□□ 0.67
CTPS1P17812 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.26■□□□□ 0.67
CTPS1P17812 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.26■□□□□ 0.67
CTPS1P17812 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CTPS1P17812 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS1P17812 AC005332.7-201ENST00000614046 2005 ntBASIC19.25■□□□□ 0.67
CTPS1P17812 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS1P17812 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CTPS1P17812 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.25■□□□□ 0.67
CTPS1P17812 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.25■□□□□ 0.67
CTPS1P17812 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTPS1P17812 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.25■□□□□ 0.67
CTPS1P17812 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS1P17812 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.25■□□□□ 0.67
CTPS1P17812 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS1P17812 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTPS1P17812 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS1P17812 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS1P17812 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CTPS1P17812 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS1P17812 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CTPS1P17812 MIR1238-201ENST00000408483 83 ntBASIC19.24■□□□□ 0.67
CTPS1P17812 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 AC097488.1-201ENST00000507834 756 ntBASIC19.24■□□□□ 0.67
CTPS1P17812 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 AP000692.2-201ENST00000608391 879 ntBASIC19.24■□□□□ 0.67
CTPS1P17812 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTPS1P17812 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS1P17812 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CTPS1P17812 KRT8P11-201ENST00000409686 1436 ntBASIC19.24■□□□□ 0.67
CTPS1P17812 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS1P17812 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.24■□□□□ 0.67
CTPS1P17812 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.24■□□□□ 0.67
CTPS1P17812 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS1P17812 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS1P17812 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS1P17812 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS1P17812 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CTPS1P17812 CRYGFP-201ENST00000418459 633 ntBASIC19.23■□□□□ 0.67
CTPS1P17812 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.23■□□□□ 0.67
CTPS1P17812 TSPY23P-201ENST00000440136 739 ntBASIC19.23■□□□□ 0.67
CTPS1P17812 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS1P17812 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.23■□□□□ 0.67
CTPS1P17812 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS1P17812 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS1P17812 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.23■□□□□ 0.67
CTPS1P17812 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.23■□□□□ 0.67
CTPS1P17812 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS1P17812 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS1P17812 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms