Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NCK1P16333 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.11■□□□□ 0.49
NCK1P16333 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NCK1P16333 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NCK1P16333 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.1■□□□□ 0.49
NCK1P16333 GPX1P1-201ENST00000388829 606 ntBASIC18.1■□□□□ 0.49
NCK1P16333 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.1■□□□□ 0.49
NCK1P16333 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.1■□□□□ 0.49
NCK1P16333 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCK1P16333 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCK1P16333 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NCK1P16333 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCK1P16333 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCK1P16333 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.09■□□□□ 0.49
NCK1P16333 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCK1P16333 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCK1P16333 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.09■□□□□ 0.49
NCK1P16333 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NCK1P16333 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCK1P16333 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NCK1P16333 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
NCK1P16333 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.09■□□□□ 0.49
NCK1P16333 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.09■□□□□ 0.49
NCK1P16333 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.09■□□□□ 0.49
NCK1P16333 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.09■□□□□ 0.49
NCK1P16333 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.09■□□□□ 0.49
NCK1P16333 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NCK1P16333 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCK1P16333 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
NCK1P16333 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCK1P16333 AC068880.1-201ENST00000507289 2297 ntBASIC18.09■□□□□ 0.49
NCK1P16333 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.08■□□□□ 0.49
NCK1P16333 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NCK1P16333 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NCK1P16333 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.08■□□□□ 0.49
NCK1P16333 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NCK1P16333 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
NCK1P16333 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NCK1P16333 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
NCK1P16333 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
NCK1P16333 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.08■□□□□ 0.48
NCK1P16333 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.08■□□□□ 0.48
NCK1P16333 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.08■□□□□ 0.48
NCK1P16333 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.08■□□□□ 0.48
NCK1P16333 OR10C1-204ENST00000622521 1039 ntBASIC18.08■□□□□ 0.48
NCK1P16333 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.08■□□□□ 0.48
NCK1P16333 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.08■□□□□ 0.48
NCK1P16333 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NCK1P16333 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NCK1P16333 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NCK1P16333 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.08■□□□□ 0.48
NCK1P16333 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCK1P16333 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.07■□□□□ 0.48
NCK1P16333 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.07■□□□□ 0.48
NCK1P16333 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NCK1P16333 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.07■□□□□ 0.48
NCK1P16333 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.07■□□□□ 0.48
NCK1P16333 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.07■□□□□ 0.48
NCK1P16333 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.07■□□□□ 0.48
NCK1P16333 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCK1P16333 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 6.9 ms