Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 AC117947.1-201ENST00000427448 529 ntBASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 PRSS44-201ENST00000515154 1146 ntBASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 AC087388.1-201ENST00000571370 1112 ntBASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 LINC01465-201ENST00000408887 1940 ntBASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB40ALP0C0E4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 RNF152P1-201ENST00000397754 604 ntBASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 AC022616.7-201ENST00000525383 220 ntBASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB40ALP0C0E4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 COX11P1-201ENST00000489116 835 ntBASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 AC141257.4-201ENST00000634557 245 ntBASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 AC136944.6-201ENST00000634818 245 ntBASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 AL031432.5-201ENST00000641059 760 ntBASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB40ALP0C0E4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 AL391422.3-201ENST00000603791 2761 ntBASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 AC139887.4-201ENST00000607877 719 ntBASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB40ALP0C0E4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAB40ALP0C0E4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms