Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A2P08572 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A2P08572 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A2P08572 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 TCF3P1-201ENST00000423021 1937 ntBASIC19.34■□□□□ 0.69
COL4A2P08572 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 AL162741.1-201ENST00000565563 1558 ntBASIC19.34■□□□□ 0.69
COL4A2P08572 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A2P08572 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A2P08572 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A2P08572 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
COL4A2P08572 AC079781.3-201ENST00000449110 356 ntBASIC19.34■□□□□ 0.69
COL4A2P08572 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A2P08572 UNC93B7-201ENST00000509439 705 ntBASIC19.34■□□□□ 0.69
COL4A2P08572 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A2P08572 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A2P08572 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A2P08572 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A2P08572 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A2P08572 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A2P08572 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A2P08572 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A2P08572 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A2P08572 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A2P08572 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A2P08572 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A2P08572 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A2P08572 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A2P08572 AC012615.1-201ENST00000565797 1299 ntBASIC19.33■□□□□ 0.68
COL4A2P08572 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A2P08572 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL4A2P08572 SDHAP1-207ENST00000440850 2000 ntBASIC19.33■□□□□ 0.68
COL4A2P08572 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A2P08572 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A2P08572 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A2P08572 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 TSSC2-201ENST00000450217 709 ntBASIC19.32■□□□□ 0.68
COL4A2P08572 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.32■□□□□ 0.68
COL4A2P08572 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.32■□□□□ 0.68
COL4A2P08572 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 AC024243.1-201ENST00000609234 778 ntBASIC19.32■□□□□ 0.68
COL4A2P08572 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A2P08572 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL4A2P08572 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A2P08572 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A2P08572 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A2P08572 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 AC004870.1-201ENST00000315132 882 ntBASIC19.31■□□□□ 0.68
COL4A2P08572 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.31■□□□□ 0.68
COL4A2P08572 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
COL4A2P08572 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 AC099778.1-201ENST00000568593 1911 ntBASIC19.31■□□□□ 0.68
COL4A2P08572 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.31■□□□□ 0.68
COL4A2P08572 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 AP000347.1-202ENST00000435868 847 ntBASIC19.31■□□□□ 0.68
COL4A2P08572 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.31■□□□□ 0.68
COL4A2P08572 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
COL4A2P08572 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL4A2P08572 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL4A2P08572 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL4A2P08572 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL4A2P08572 AL023284.2-201ENST00000405850 579 ntBASIC19.3■□□□□ 0.68
COL4A2P08572 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.3■□□□□ 0.68
COL4A2P08572 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.3■□□□□ 0.68
COL4A2P08572 KRT8P26-201ENST00000534154 1276 ntBASIC19.3■□□□□ 0.68
COL4A2P08572 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.3■□□□□ 0.68
COL4A2P08572 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.3■□□□□ 0.68
COL4A2P08572 AP002414.4-201ENST00000589764 1148 ntBASIC19.3■□□□□ 0.68
COL4A2P08572 AL136038.4-201ENST00000603606 1261 ntBASIC19.3■□□□□ 0.68
COL4A2P08572 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL4A2P08572 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL4A2P08572 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.29■□□□□ 0.68
COL4A2P08572 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL4A2P08572 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL4A2P08572 TSPY12P-201ENST00000421279 868 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms