Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
MT-ND3P03897 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-ND3P03897 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND3P03897 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-ND3P03897 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 GCSHP5-201ENST00000443090 522 ntBASIC19.49■□□□□ 0.71
MT-ND3P03897 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND3P03897 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.49■□□□□ 0.71
MT-ND3P03897 AC142381.4-202ENST00000563973 229 ntBASIC19.49■□□□□ 0.71
MT-ND3P03897 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
MT-ND3P03897 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND3P03897 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.49■□□□□ 0.71
MT-ND3P03897 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MT-ND3P03897 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MT-ND3P03897 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND3P03897 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND3P03897 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-ND3P03897 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-ND3P03897 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-ND3P03897 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.48■□□□□ 0.71
MT-ND3P03897 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 AC007613.1-201ENST00000572811 2597 ntBASIC19.48■□□□□ 0.71
MT-ND3P03897 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND3P03897 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 AC116351.2-201ENST00000606540 1585 ntBASIC19.48■□□□□ 0.71
MT-ND3P03897 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MT-ND3P03897 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MT-ND3P03897 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.48■□□□□ 0.71
MT-ND3P03897 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND3P03897 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
MT-ND3P03897 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
MT-ND3P03897 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.47■□□□□ 0.71
MT-ND3P03897 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MT-ND3P03897 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.47■□□□□ 0.71
MT-ND3P03897 AC098590.1-201ENST00000468126 897 ntBASIC19.47■□□□□ 0.71
MT-ND3P03897 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MT-ND3P03897 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.47■□□□□ 0.71
MT-ND3P03897 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-ND3P03897 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.47■□□□□ 0.71
MT-ND3P03897 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MT-ND3P03897 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms