Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 CERCAM-206ENST00000447915 530 ntTSL 513.08□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 TARS2-208ENST00000463555 852 ntTSL 513.08□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 DCTD-216ENST00000513383 517 ntTSL 313.07□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 GDI2-206ENST00000456041 918 ntTSL 513.06□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 SULT2B1-203ENST00000594274 716 ntTSL 313.05□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 PASK-216ENST00000629419 216 ntTSL 5 BASIC13.05□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 NUP85-202ENST00000449421 1287 ntTSL 213.04□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 ACADM-207ENST00000525881 914 ntTSL 213.04□□□□□ -0.322e-11■■■■■ 137.9
SF3B1O75533 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.323e-6■■■■■ 137.9
SF3B1O75533 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC13.02□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 SH3BP1-203ENST00000451997 3123 ntTSL 213.01□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 CDADC1-205ENST00000496061 688 ntTSL 1 (best)13.01□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 RFLNA-204ENST00000545615 449 ntTSL 313□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC13□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC12.97□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC12.96□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 IGHMBP2-207ENST00000543739 2846 ntTSL 212.96□□□□□ -0.333e-6■■■■■ 137.9
SF3B1O75533 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC12.95□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 ZNF410-217ENST00000556396 1961 ntTSL 212.95□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 TALDO1-204ENST00000530119 1191 ntTSL 212.93□□□□□ -0.342e-11■■■■■ 137.9
SF3B1O75533 DLD-202ENST00000415325 1802 ntTSL 212.93□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 SEPT9-238ENST00000591472 555 ntTSL 412.92□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 CENPT-213ENST00000564346 571 ntTSL 412.92□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC12.92□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 LMBR1L-228ENST00000552879 568 ntTSL 412.92□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC12.91□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 LANCL1-206ENST00000448951 808 ntTSL 312.9□□□□□ -0.343e-6■■■■■ 137.9
SF3B1O75533 CYFIP2-207ENST00000520942 771 ntTSL 312.89□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 DHRS4-AS1-206ENST00000558423 584 ntTSL 412.89□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 TMTC4-205ENST00000440120 584 ntTSL 412.88□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 PPP6R1-208ENST00000592242 574 ntTSL 412.88□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 CRELD1-207ENST00000465716 889 ntTSL 212.88□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC12.87□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 ZNF814-205ENST00000595295 909 ntTSL 2 BASIC12.86□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 COG7-202ENST00000561854 814 ntTSL 312.85□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC12.84□□□□□ -0.353e-6■■■■■ 137.9
SF3B1O75533 POLR3C-202ENST00000369294 1590 ntTSL 1 (best) BASIC12.82□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 NDUFS4-203ENST00000506765 559 ntTSL 212.82□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 EMP3-205ENST00000597057 406 ntTSL 212.82□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 TMEM39B-208ENST00000487305 2087 ntTSL 212.81□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 TRIM5-207ENST00000438025 767 ntTSL 312.8□□□□□ -0.365e-6■■■■■ 137.9
SF3B1O75533 SNCA-202ENST00000345009 1096 ntTSL 1 (best) BASIC12.8□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC12.79□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.363e-6■■■■■ 137.9
SF3B1O75533 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC12.77□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 ASIC4-203ENST00000461395 3340 ntTSL 1 (best)12.76□□□□□ -0.374e-6■■■■■ 137.9
SF3B1O75533 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC12.76□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.75□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.75□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 RPS6KB2-206ENST00000525726 497 ntTSL 312.74□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 ABI2-224ENST00000494215 717 ntTSL 212.74□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 CRTC2-205ENST00000467860 573 ntTSL 312.72□□□□□ -0.372e-11■■■■■ 137.9
SF3B1O75533 PLAUR-213ENST00000599892 742 ntTSL 212.72□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 CLIP1-208ENST00000537004 2000 ntTSL 1 (best)12.72□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.373e-6■■■■■ 137.9
SF3B1O75533 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 SERPINF1-202ENST00000570731 459 ntTSL 512.7□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC12.7□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC12.7□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.69□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC12.68□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.383e-6■■■■■ 137.9
SF3B1O75533 PRKACA-210ENST00000593092 922 ntTSL 212.64□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC12.64□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 BRD9-203ENST00000475706 744 ntTSL 1 (best)12.63□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 NUP85-224ENST00000583948 1197 ntTSL 212.62□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC12.62□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 GDI2-204ENST00000418688 636 ntTSL 512.62□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 DHRS4-AS1-203ENST00000554036 509 ntTSL 312.61□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 PSTK-204ENST00000465232 818 ntTSL 312.61□□□□□ -0.393e-6■■■■■ 137.9
SF3B1O75533 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.43e-6■■■■■ 137.9
SF3B1O75533 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.43e-6■■■■■ 137.9
SF3B1O75533 ARHGAP25-206ENST00000463483 1227 ntTSL 212.55□□□□□ -0.43e-6■■■■■ 137.9
SF3B1O75533 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC12.52□□□□□ -0.43e-6■■■■■ 137.9
SF3B1O75533 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.43e-6■■■■■ 137.9
SF3B1O75533 ACTR3B-204ENST00000479402 5543 ntTSL 212.52□□□□□ -0.413e-6■■■■■ 137.9
SF3B1O75533 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-6■■■■■ 137.9
SF3B1O75533 SNX15-205ENST00000526702 4713 ntTSL 212.51□□□□□ -0.415e-6■■■■■ 137.9
SF3B1O75533 CCDC162P-213ENST00000638844 2926 ntTSL 512.5□□□□□ -0.413e-6■■■■■ 137.9
SF3B1O75533 DYRK4-205ENST00000537719 454 ntTSL 312.49□□□□□ -0.413e-6■■■■■ 137.9
SF3B1O75533 RTTN-207ENST00000581583 2355 ntTSL 212.49□□□□□ -0.413e-6■■■■■ 137.9
SF3B1O75533 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC12.48□□□□□ -0.413e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1215.7 ms