Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.36■□□□□ 0.53
CPNE3O75131 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE3O75131 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE3O75131 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE3O75131 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE3O75131 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 AL049597.2-201ENST00000565575 961 ntBASIC18.36■□□□□ 0.53
CPNE3O75131 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CPNE3O75131 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE3O75131 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
CPNE3O75131 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 LIN28AP1-201ENST00000429574 405 ntBASIC18.35■□□□□ 0.53
CPNE3O75131 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CPNE3O75131 AC008040.2-201ENST00000461049 708 ntBASIC18.35■□□□□ 0.53
CPNE3O75131 AC091390.4-202ENST00000476426 537 ntBASIC18.35■□□□□ 0.53
CPNE3O75131 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE3O75131 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CPNE3O75131 AL691432.2-201ENST00000607222 2038 ntBASIC18.35■□□□□ 0.53
CPNE3O75131 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE3O75131 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 ATP5G1P1-201ENST00000448724 379 ntBASIC18.34■□□□□ 0.53
CPNE3O75131 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE3O75131 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE3O75131 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 AL590326.2-201ENST00000625139 305 ntBASIC18.34■□□□□ 0.53
CPNE3O75131 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 AL162377.1-201ENST00000618844 1793 ntBASIC18.34■□□□□ 0.53
CPNE3O75131 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPNE3O75131 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE3O75131 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE3O75131 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE3O75131 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.33■□□□□ 0.53
CPNE3O75131 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CPNE3O75131 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE3O75131 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE3O75131 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CPNE3O75131 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE3O75131 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE3O75131 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE3O75131 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE3O75131 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE3O75131 ECEL1P2-202ENST00000465689 757 ntBASIC18.33■□□□□ 0.52
CPNE3O75131 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPNE3O75131 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE3O75131 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE3O75131 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE3O75131 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPNE3O75131 AC073508.3-201ENST00000619697 1419 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms