Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.56■■□□□ 1.04
CHMP2AO43633 NAPSB-206ENST00000562112 1266 ntBASIC21.56■■□□□ 1.04
CHMP2AO43633 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.56■■□□□ 1.04
CHMP2AO43633 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CHMP2AO43633 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP2AO43633 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.55■■□□□ 1.04
CHMP2AO43633 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP2AO43633 LINC01023-201ENST00000606054 436 ntBASIC21.55■■□□□ 1.04
CHMP2AO43633 AC010947.1-201ENST00000623454 693 ntBASIC21.55■■□□□ 1.04
CHMP2AO43633 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.55■■□□□ 1.04
CHMP2AO43633 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHMP2AO43633 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.55■■□□□ 1.04
CHMP2AO43633 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP2AO43633 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 AC093484.2-201ENST00000580996 2166 ntBASIC21.54■■□□□ 1.04
CHMP2AO43633 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHMP2AO43633 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CHMP2AO43633 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.54■■□□□ 1.04
CHMP2AO43633 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 AC096733.2-201ENST00000609937 1394 ntBASIC21.54■■□□□ 1.04
CHMP2AO43633 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CHMP2AO43633 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.54■■□□□ 1.04
CHMP2AO43633 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CHMP2AO43633 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHMP2AO43633 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CHMP2AO43633 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.53■■□□□ 1.04
CHMP2AO43633 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP2AO43633 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP2AO43633 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
CHMP2AO43633 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.53■■□□□ 1.04
CHMP2AO43633 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHMP2AO43633 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2AO43633 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2AO43633 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2AO43633 LINC01568-207ENST00000641790 1380 ntBASIC21.52■■□□□ 1.04
CHMP2AO43633 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 TSPY23P-201ENST00000440136 739 ntBASIC21.52■■□□□ 1.04
CHMP2AO43633 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.52■■□□□ 1.04
CHMP2AO43633 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.52■■□□□ 1.04
CHMP2AO43633 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CHMP2AO43633 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.52■■□□□ 1.04
CHMP2AO43633 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2AO43633 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
CHMP2AO43633 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHMP2AO43633 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.52■■□□□ 1.03
CHMP2AO43633 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHMP2AO43633 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms