Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.64■□□□□ 0.25
XRCC2O43543 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 AC133681.1-201ENST00000465482 601 ntBASIC16.64■□□□□ 0.25
XRCC2O43543 AC006058.3-201ENST00000606217 1069 ntBASIC16.64■□□□□ 0.25
XRCC2O43543 AC110285.5-201ENST00000611501 352 ntBASIC16.64■□□□□ 0.25
XRCC2O43543 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
XRCC2O43543 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
XRCC2O43543 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
XRCC2O43543 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XRCC2O43543 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
XRCC2O43543 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.63■□□□□ 0.25
XRCC2O43543 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 AL160286.2-201ENST00000567150 934 ntBASIC16.63■□□□□ 0.25
XRCC2O43543 RN7SL471P-201ENST00000580476 299 ntBASIC16.63■□□□□ 0.25
XRCC2O43543 AC124016.1-201ENST00000609552 612 ntBASIC16.63■□□□□ 0.25
XRCC2O43543 AC073648.6-201ENST00000641589 218 ntBASIC16.63■□□□□ 0.25
XRCC2O43543 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.63■□□□□ 0.25
XRCC2O43543 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.63■□□□□ 0.25
XRCC2O43543 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XRCC2O43543 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
XRCC2O43543 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC2O43543 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
XRCC2O43543 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.62■□□□□ 0.25
XRCC2O43543 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.62■□□□□ 0.25
XRCC2O43543 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 HLA-A-209ENST00000638375 975 ntBASIC16.62■□□□□ 0.25
XRCC2O43543 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XRCC2O43543 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.62■□□□□ 0.25
XRCC2O43543 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms