Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PHGDHO43175 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.05■□□□□ 0.64
PHGDHO43175 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 AL355802.2-201ENST00000402069 882 ntBASIC19.05■□□□□ 0.64
PHGDHO43175 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 AC104581.1-202ENST00000635932 2618 ntBASIC19.05■□□□□ 0.64
PHGDHO43175 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.05■□□□□ 0.64
PHGDHO43175 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHGDHO43175 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
PHGDHO43175 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
PHGDHO43175 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
PHGDHO43175 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.04■□□□□ 0.64
PHGDHO43175 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
PHGDHO43175 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PHGDHO43175 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.04■□□□□ 0.64
PHGDHO43175 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHGDHO43175 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.04■□□□□ 0.64
PHGDHO43175 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PHGDHO43175 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PHGDHO43175 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.03■□□□□ 0.64
PHGDHO43175 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 POM121L13P-201ENST00000422362 380 ntBASIC19.03■□□□□ 0.64
PHGDHO43175 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.03■□□□□ 0.64
PHGDHO43175 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
PHGDHO43175 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PHGDHO43175 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PHGDHO43175 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHGDHO43175 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.02■□□□□ 0.64
PHGDHO43175 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PHGDHO43175 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHGDHO43175 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms