Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3D1O14617 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3D1O14617 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.9■□□□□ 0.46
AP3D1O14617 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3D1O14617 UNC93B4-201ENST00000505679 747 ntBASIC17.9■□□□□ 0.46
AP3D1O14617 UNC93B5-201ENST00000530315 699 ntBASIC17.9■□□□□ 0.46
AP3D1O14617 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3D1O14617 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 AL121906.2-201ENST00000621597 723 ntBASIC17.9■□□□□ 0.46
AP3D1O14617 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3D1O14617 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3D1O14617 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3D1O14617 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3D1O14617 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP3D1O14617 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
AP3D1O14617 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3D1O14617 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3D1O14617 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.89■□□□□ 0.45
AP3D1O14617 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3D1O14617 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3D1O14617 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3D1O14617 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3D1O14617 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.89■□□□□ 0.45
AP3D1O14617 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 FZD10-202ENST00000539839 3282 ntBASIC17.88■□□□□ 0.45
AP3D1O14617 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
AP3D1O14617 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.88■□□□□ 0.45
AP3D1O14617 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP3D1O14617 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3D1O14617 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
AP3D1O14617 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
AP3D1O14617 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.87■□□□□ 0.45
AP3D1O14617 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
AP3D1O14617 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP3D1O14617 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP3D1O14617 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
AP3D1O14617 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.87■□□□□ 0.45
AP3D1O14617 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
AP3D1O14617 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3D1O14617 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.87■□□□□ 0.45
AP3D1O14617 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.87■□□□□ 0.45
AP3D1O14617 AC008403.3-201ENST00000598924 454 ntBASIC17.87■□□□□ 0.45
AP3D1O14617 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3D1O14617 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms