Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCL21O00585 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCL21O00585 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 TSSC2-201ENST00000450217 709 ntBASIC16.87■□□□□ 0.29
CCL21O00585 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.87■□□□□ 0.29
CCL21O00585 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL21O00585 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL21O00585 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCL21O00585 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL21O00585 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCL21O00585 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCL21O00585 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL21O00585 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL21O00585 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL21O00585 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.86■□□□□ 0.29
CCL21O00585 AC111152.3-201ENST00000569699 673 ntBASIC16.86■□□□□ 0.29
CCL21O00585 AC011498.5-201ENST00000592027 486 ntBASIC16.86■□□□□ 0.29
CCL21O00585 AC024243.1-201ENST00000609234 778 ntBASIC16.86■□□□□ 0.29
CCL21O00585 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL21O00585 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL21O00585 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL21O00585 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL21O00585 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
CCL21O00585 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL21O00585 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 AC004870.1-201ENST00000315132 882 ntBASIC16.85■□□□□ 0.29
CCL21O00585 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL21O00585 AC246785.2-201ENST00000432512 513 ntBASIC16.85■□□□□ 0.29
CCL21O00585 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCL21O00585 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL21O00585 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL21O00585 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL21O00585 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL21O00585 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL21O00585 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL21O00585 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL21O00585 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CCL21O00585 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCL21O00585 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL21O00585 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 AL845331.1-201ENST00000424978 1190 ntBASIC16.84■□□□□ 0.29
CCL21O00585 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL21O00585 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL21O00585 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.84■□□□□ 0.29
CCL21O00585 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL21O00585 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL21O00585 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL21O00585 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL21O00585 AP005212.1-201ENST00000581547 1997 ntBASIC16.84■□□□□ 0.29
CCL21O00585 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL21O00585 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms