Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3FA6NER0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3FA6NER0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3FA6NER0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3FA6NER0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 AC011558.1-201ENST00000623459 338 ntBASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3FA6NER0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3FA6NER0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 FAM8A6P-201ENST00000407496 1135 ntBASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 KRT8P45-201ENST00000414328 1447 ntBASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3FA6NER0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 SDHAP1-207ENST00000440850 2000 ntBASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3FA6NER0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms