Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 MIR4497-201ENST00000583208 89 ntBASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-4A0A0C4DH59 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC093827.2-201ENST00000512654 315 ntBASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV5-4A0A0C4DH59 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV5-4A0A0C4DH59 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV5-4A0A0C4DH59 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 KRT17P2-201ENST00000300992 1314 ntBASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV5-4A0A0C4DH59 RBM17P1-201ENST00000453646 1190 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms