Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC073130.3-201ENST00000624389 2278 ntBASIC14.43□□□□□ -0.1
TRAV25A0A0B4J276 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 AC097488.1-201ENST00000507834 756 ntBASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 AC096733.2-201ENST00000609937 1394 ntBASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV25A0A0B4J276 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 FITM1-202ENST00000559294 800 ntBASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 SLC25A1P4-201ENST00000567977 778 ntBASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 LINC01465-201ENST00000408887 1940 ntBASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV25A0A0B4J276 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 Z82202.1-201ENST00000623446 1880 ntBASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 MMP23A-201ENST00000234610 1017 ntBASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 BX088651.1-201ENST00000540551 451 ntBASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV25A0A0B4J276 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms