Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 UBE2SP1-201ENST00000450587 669 ntBASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 KRT16P1-201ENST00000399124 1418 ntBASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PRORSD1P-201ENST00000295112 541 ntBASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AF186192.3-201ENST00000583427 947 ntBASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC073195.1-201ENST00000607241 877 ntBASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AL031985.4-201ENST00000642138 673 ntBASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FEM1AP3-201ENST00000403722 1741 ntBASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC026271.3-201ENST00000571884 352 ntBASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 AP001412.1-201ENST00000608405 714 ntBASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV7-1A0A0A6YYK4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms