Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV27A0A087WT01 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV27A0A087WT01 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 POM121L13P-201ENST00000422362 380 ntBASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 AC104581.1-202ENST00000635932 2618 ntBASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV27A0A087WT01 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV27A0A087WT01 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms