Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ACTN4O43707 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ACTN4O43707 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ACTN4O43707 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ACTN4O43707 BRAFP1-201ENST00000445336 2703 ntBASIC6.33□□□□□ -1.4
ACTN4O43707 RLIMP1-201ENST00000339626 1680 ntBASIC6.33□□□□□ -1.4
ACTN4O43707 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 AL391684.1-202ENST00000641293 1636 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.32□□□□□ -1.4
ACTN4O43707 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ACTN4O43707 AC093849.1-201ENST00000563631 2209 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 LINC02555-201ENST00000563933 1951 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 RNA5SP391-201ENST00000363456 119 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RNU6-1020P-201ENST00000363684 107 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ACTN4O43707 U3.42-201ENST00000408746 214 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RNU4-65P-201ENST00000410473 140 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RNU6-325P-201ENST00000411132 105 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RPS23P10-201ENST00000416185 486 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 GAPDHP27-201ENST00000447427 1020 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RNU6-1218P-201ENST00000458990 108 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 RPL37P6-201ENST00000460682 294 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AC053481.1-201ENST00000467217 306 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 SEPT14P8-201ENST00000508026 178 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.32□□□□□ -1.4
ACTN4O43707 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.32□□□□□ -1.4
ACTN4O43707 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.32□□□□□ -1.4
ACTN4O43707 AC136932.1-201ENST00000574771 208 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.32□□□□□ -1.4
ACTN4O43707 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.32□□□□□ -1.4
ACTN4O43707 AC068790.4-201ENST00000602474 263 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AC007619.2-201ENST00000605743 379 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AC090607.5-201ENST00000615692 224 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 AL365265.1-201ENST00000621045 234 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ACTN4O43707 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.32□□□□□ -1.4
ACTN4O43707 AC109446.4-201ENST00000623235 2755 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
ACTN4O43707 AL031119.1-201ENST00000404707 1879 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.32□□□□□ -1.4
ACTN4O43707 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ACTN4O43707 AC090740.1-201ENST00000623193 2262 ntBASIC6.32□□□□□ -1.4
ACTN4O43707 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
ACTN4O43707 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ACTN4O43707 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ACTN4O43707 RN7SKP275-201ENST00000364626 301 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.31□□□□□ -1.4
ACTN4O43707 RNU11-4P-201ENST00000391149 133 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.31□□□□□ -1.4
ACTN4O43707 RPS15AP6-201ENST00000420703 385 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AL035660.1-201ENST00000422041 222 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AL160275.3-201ENST00000423876 471 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 NDUFB4P8-201ENST00000435351 367 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.31□□□□□ -1.4
ACTN4O43707 AL390119.1-201ENST00000440329 312 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 AZGP1P2-201ENST00000454506 345 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 RPL21P104-201ENST00000464143 478 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 HMGN2P13-201ENST00000476476 274 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AC012123.2-201ENST00000485809 248 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.31□□□□□ -1.4
ACTN4O43707 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 AC007016.1-201ENST00000512110 244 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.31□□□□□ -1.4
ACTN4O43707 RNU6-62P-201ENST00000516526 102 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 RNU6-677P-201ENST00000516914 101 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.31□□□□□ -1.4
ACTN4O43707 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.31□□□□□ -1.4
ACTN4O43707 RPL21P7-201ENST00000557463 483 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 MIR4311-201ENST00000580794 100 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 AL121917.1-203ENST00000605534 577 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 MIR3976-201ENST00000606807 139 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.31□□□□□ -1.4
ACTN4O43707 AC005344.1-201ENST00000613391 459 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.31□□□□□ -1.4
ACTN4O43707 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.31□□□□□ -1.4
ACTN4O43707 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ACTN4O43707 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms