RNA–Protein interactions for RNA: ENST00000581478.5

MSMB-201, Transcript of microseminoprotein beta, humanhuman

TSL 1 (best) BASIC

Gene MSMB, Length 386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSMB-201ENST00000581478 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
MSMB-201ENST00000581478 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
MSMB-201ENST00000581478 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
MSMB-201ENST00000581478 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
MSMB-201ENST00000581478 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
MSMB-201ENST00000581478 FOXD1Q16676 465 aa11.2□□□□□ -0.62
MSMB-201ENST00000581478 ADRA2BP18089 450 aa11.03□□□□□ -0.64
MSMB-201ENST00000581478 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
MSMB-201ENST00000581478 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
MSMB-201ENST00000581478 POTEDQ86YR6 584 aa10.6□□□□□ -0.71
MSMB-201ENST00000581478 KCNA4P22459 653 aa10.56□□□□□ -0.72
MSMB-201ENST00000581478 MSH5O43196 834 aa10.47□□□□□ -0.73
MSMB-201ENST00000581478 PPP4R3CPQ6ZMV5 832 aa10.43□□□□□ -0.74
MSMB-201ENST00000581478 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
MSMB-201ENST00000581478 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
MSMB-201ENST00000581478 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
MSMB-201ENST00000581478 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
MSMB-201ENST00000581478 NPM3O75607 178 aaKnown RBP10.1□□□□□ -0.79
MSMB-201ENST00000581478 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
MSMB-201ENST00000581478 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
MSMB-201ENST00000581478 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
MSMB-201ENST00000581478 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
MSMB-201ENST00000581478 DNAJC5BQ9UF47 199 aa9.77□□□□□ -0.85
MSMB-201ENST00000581478 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
MSMB-201ENST00000581478 ZBTB22O15209 634 aa9.71□□□□□ -0.86
MSMB-201ENST00000581478 HOXD11P31277 338 aaPredicted RBP9.66□□□□□ -0.86
MSMB-201ENST00000581478 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
MSMB-201ENST00000581478 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
MSMB-201ENST00000581478 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
MSMB-201ENST00000581478 DCAF8L1A6NGE4 600 aa9.31□□□□□ -0.92
MSMB-201ENST00000581478 ATXN8OSP0DMR3 200 aa9.28□□□□□ -0.92
MSMB-201ENST00000581478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.22□□□□□ -0.93
MSMB-201ENST00000581478 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
MSMB-201ENST00000581478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
MSMB-201ENST00000581478 HNRNPUL2Q1KMD3 747 aaKnown RBP9.13□□□□□ -0.95
MSMB-201ENST00000581478 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
MSMB-201ENST00000581478 U3KPZ7 1027 aaPredicted RBP9.1□□□□□ -0.95
MSMB-201ENST00000581478 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
MSMB-201ENST00000581478 APLP2Q06481 763 aa8.98□□□□□ -0.97
MSMB-201ENST00000581478 FKBP8Q14318 412 aa8.98□□□□□ -0.97
MSMB-201ENST00000581478 RNF39Q9H2S5 420 aa8.91□□□□□ -0.98
MSMB-201ENST00000581478 ZNF219Q9P2Y4 722 aaPredicted RBP8.88□□□□□ -0.99
MSMB-201ENST00000581478 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
MSMB-201ENST00000581478 C1QBPQ07021 282 aaKnown RBP8.78□□□□□ -1
MSMB-201ENST00000581478 TRHP20396 242 aaPredicted RBP8.74□□□□□ -1.01
MSMB-201ENST00000581478 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
MSMB-201ENST00000581478 SPINK5Q9NQ38 1064 aaPredicted RBP8.73□□□□□ -1.01
MSMB-201ENST00000581478 CAPN15O75808 1086 aa8.71□□□□□ -1.02
MSMB-201ENST00000581478 FBLN2P98095 1184 aa8.69□□□□□ -1.02
MSMB-201ENST00000581478 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
MSMB-201ENST00000581478 SPDYE4A6NLX3 237 aa8.65□□□□□ -1.02
MSMB-201ENST00000581478 POLA2Q14181 598 aa8.65□□□□□ -1.02
MSMB-201ENST00000581478 ZBTB12Q9Y330 459 aaPredicted RBP8.6□□□□□ -1.03
MSMB-201ENST00000581478 FBXO3Q9UK99 471 aa8.59□□□□□ -1.03
MSMB-201ENST00000581478 ABCB7O75027 752 aa8.56□□□□□ -1.04
MSMB-201ENST00000581478 PROM2Q8N271 834 aa8.56□□□□□ -1.04
MSMB-201ENST00000581478 SLC24A1O60721 1099 aa8.48□□□□□ -1.05
MSMB-201ENST00000581478 DSG3P32926 999 aa8.46□□□□□ -1.06
MSMB-201ENST00000581478 VASPP50552 380 aaPredicted RBP8.46□□□□□ -1.06
MSMB-201ENST00000581478 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
MSMB-201ENST00000581478 SPDYE2BA6NHP3 402 aa8.37□□□□□ -1.07
MSMB-201ENST00000581478 SPDYE6P0CI01 402 aa8.37□□□□□ -1.07
MSMB-201ENST00000581478 SPDYE2Q495Y8 402 aa8.37□□□□□ -1.07
MSMB-201ENST00000581478 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
MSMB-201ENST00000581478 IFNLR1Q8IU57 520 aaPredicted RBP8.34□□□□□ -1.07
MSMB-201ENST00000581478 SSUH2Q9Y2M2 353 aa8.33□□□□□ -1.08
MSMB-201ENST00000581478 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
MSMB-201ENST00000581478 POTEHQ6S545 545 aa8.27□□□□□ -1.09
MSMB-201ENST00000581478 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
MSMB-201ENST00000581478 KLHL34Q8N239 644 aa8.23□□□□□ -1.09
MSMB-201ENST00000581478 PLCD3Q8N3E9 789 aa8.21□□□□□ -1.1
MSMB-201ENST00000581478 SPOCK2Q92563 424 aa8.21□□□□□ -1.1
MSMB-201ENST00000581478 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
MSMB-201ENST00000581478 PKD2Q13563 968 aa8.18□□□□□ -1.1
MSMB-201ENST00000581478 MIER1Q8N108 512 aa8.16□□□□□ -1.1
MSMB-201ENST00000581478 PLEKHG5O94827 1062 aa8.15□□□□□ -1.1
MSMB-201ENST00000581478 ZBTB47Q9UFB7 747 aaPredicted RBP8.12□□□□□ -1.11
MSMB-201ENST00000581478 ECM2O94769 699 aaPredicted RBP8.1□□□□□ -1.11
MSMB-201ENST00000581478 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
MSMB-201ENST00000581478 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
MSMB-201ENST00000581478 SPDYE1Q8NFV5 336 aaPredicted RBP8.05□□□□□ -1.12
MSMB-201ENST00000581478 AKT1S1Q96B36 256 aa8.05□□□□□ -1.12
MSMB-201ENST00000581478 CIZ1Q9ULV3 898 aaPredicted RBP8.02□□□□□ -1.13
MSMB-201ENST00000581478 RGL2O15211 777 aa8□□□□□ -1.13
MSMB-201ENST00000581478 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
MSMB-201ENST00000581478 TRIM41Q8WV44 630 aa7.99□□□□□ -1.13
MSMB-201ENST00000581478 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
MSMB-201ENST00000581478 CLEC11AQ9Y240 323 aa7.98□□□□□ -1.13
MSMB-201ENST00000581478 BBXQ8WY36 941 aaPredicted RBP7.97□□□□□ -1.13
MSMB-201ENST00000581478 PRR29P0C7W0 189 aa7.95□□□□□ -1.14
MSMB-201ENST00000581478 GSE1Q14687 1217 aa7.95□□□□□ -1.14
MSMB-201ENST00000581478 REM2Q8IYK8 340 aaPredicted RBP7.95□□□□□ -1.14
MSMB-201ENST00000581478 NPM1P06748 294 aaKnown RBP eCLIP7.93□□□□□ -1.14
MSMB-201ENST00000581478 NUBP1P53384 320 aa7.91□□□□□ -1.14
MSMB-201ENST00000581478 CREBZFQ9NS37 354 aa7.91□□□□□ -1.14
MSMB-201ENST00000581478 PAXIP1Q6ZW49 1069 aaPredicted RBP7.9□□□□□ -1.14
MSMB-201ENST00000581478 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
MSMB-201ENST00000581478 FAM212AQ96EL1 285 aa7.89□□□□□ -1.15
MSMB-201ENST00000581478 DCAF8Q5TAQ9 597 aa7.88□□□□□ -1.15
MSMB-201ENST00000581478 CFAP44Q96MT7 982 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms