RNA–Protein interactions for RNA: ENST00000391149.1

RNU11-4P-201, Transcript of RNA, U11 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU11-4P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-4P-201ENST00000391149 CHIC1Q5VXU3 224 aa14.1□□□□□ -0.15
RNU11-4P-201ENST00000391149 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
RNU11-4P-201ENST00000391149 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
RNU11-4P-201ENST00000391149 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
RNU11-4P-201ENST00000391149 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
RNU11-4P-201ENST00000391149 FOXD1Q16676 465 aa10.87□□□□□ -0.67
RNU11-4P-201ENST00000391149 ADRA2BP18089 450 aa10.8□□□□□ -0.68
RNU11-4P-201ENST00000391149 PPP6R1Q9UPN7 881 aa10.78□□□□□ -0.68
RNU11-4P-201ENST00000391149 KCNA4P22459 653 aa10.52□□□□□ -0.73
RNU11-4P-201ENST00000391149 PIAS4Q8N2W9 510 aaPredicted RBP10.36□□□□□ -0.75
RNU11-4P-201ENST00000391149 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
RNU11-4P-201ENST00000391149 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
RNU11-4P-201ENST00000391149 NCBP3Q53F19 620 aaKnown RBP10.25□□□□□ -0.77
RNU11-4P-201ENST00000391149 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
RNU11-4P-201ENST00000391149 NISCHQ9Y2I1 1504 aa10.05□□□□□ -0.8
RNU11-4P-201ENST00000391149 SCAF1Q9H7N4 1312 aaKnown RBP10.04□□□□□ -0.8
RNU11-4P-201ENST00000391149 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
RNU11-4P-201ENST00000391149 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
RNU11-4P-201ENST00000391149 CNKSR2Q8WXI2 1034 aa9.97□□□□□ -0.81
RNU11-4P-201ENST00000391149 MSH5O43196 834 aa9.94□□□□□ -0.82
RNU11-4P-201ENST00000391149 DNAJC5BQ9UF47 199 aa9.78□□□□□ -0.84
RNU11-4P-201ENST00000391149 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
RNU11-4P-201ENST00000391149 ZBTB22O15209 634 aa9.66□□□□□ -0.86
RNU11-4P-201ENST00000391149 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
RNU11-4P-201ENST00000391149 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
RNU11-4P-201ENST00000391149 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
RNU11-4P-201ENST00000391149 HOXD11P31277 338 aaPredicted RBP9.5□□□□□ -0.89
RNU11-4P-201ENST00000391149 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
RNU11-4P-201ENST00000391149 ATXN8OSP0DMR3 200 aa9.32□□□□□ -0.92
RNU11-4P-201ENST00000391149 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
RNU11-4P-201ENST00000391149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.07□□□□□ -0.96
RNU11-4P-201ENST00000391149 HNRNPUL2Q1KMD3 747 aaKnown RBP9.07□□□□□ -0.96
RNU11-4P-201ENST00000391149 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
RNU11-4P-201ENST00000391149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
RNU11-4P-201ENST00000391149 SAMD1Q6SPF0 538 aaPredicted RBP9.03□□□□□ -0.96
RNU11-4P-201ENST00000391149 FKBP8Q14318 412 aa9.02□□□□□ -0.97
RNU11-4P-201ENST00000391149 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
RNU11-4P-201ENST00000391149 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
RNU11-4P-201ENST00000391149 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
RNU11-4P-201ENST00000391149 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
RNU11-4P-201ENST00000391149 APLP2Q06481 763 aa8.89□□□□□ -0.99
RNU11-4P-201ENST00000391149 CCDC180Q9P1Z9 1646 aa8.89□□□□□ -0.99
RNU11-4P-201ENST00000391149 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
RNU11-4P-201ENST00000391149 ABCC9O60706 1549 aa8.8□□□□□ -1
RNU11-4P-201ENST00000391149 ZNF219Q9P2Y4 722 aaPredicted RBP8.8□□□□□ -1
RNU11-4P-201ENST00000391149 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
RNU11-4P-201ENST00000391149 SPDYE4A6NLX3 237 aa8.63□□□□□ -1.03
RNU11-4P-201ENST00000391149 FBLN2P98095 1184 aa8.61□□□□□ -1.03
RNU11-4P-201ENST00000391149 PROM2Q8N271 834 aa8.57□□□□□ -1.04
RNU11-4P-201ENST00000391149 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
RNU11-4P-201ENST00000391149 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
RNU11-4P-201ENST00000391149 POLA2Q14181 598 aa8.52□□□□□ -1.05
RNU11-4P-201ENST00000391149 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
RNU11-4P-201ENST00000391149 ZBTB12Q9Y330 459 aaPredicted RBP8.5□□□□□ -1.05
RNU11-4P-201ENST00000391149 C1QBPQ07021 282 aaKnown RBP8.49□□□□□ -1.05
RNU11-4P-201ENST00000391149 SPINK5Q9NQ38 1064 aaPredicted RBP8.49□□□□□ -1.05
RNU11-4P-201ENST00000391149 CAPN15O75808 1086 aa8.48□□□□□ -1.05
RNU11-4P-201ENST00000391149 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
RNU11-4P-201ENST00000391149 DCAF8L2P0C7V8 631 aa8.43□□□□□ -1.06
RNU11-4P-201ENST00000391149 RB1CC1Q8TDY2 1594 aa8.39□□□□□ -1.07
RNU11-4P-201ENST00000391149 ZCCHC6Q5VYS8 1495 aaKnown RBP8.39□□□□□ -1.07
RNU11-4P-201ENST00000391149 IFNLR1Q8IU57 520 aaPredicted RBP8.37□□□□□ -1.07
RNU11-4P-201ENST00000391149 NACADO15069 1562 aa8.36□□□□□ -1.07
RNU11-4P-201ENST00000391149 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
RNU11-4P-201ENST00000391149 STAG3Q9UJ98 1225 aa8.31□□□□□ -1.08
RNU11-4P-201ENST00000391149 ABCB7O75027 752 aa8.3□□□□□ -1.08
RNU11-4P-201ENST00000391149 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
RNU11-4P-201ENST00000391149 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
RNU11-4P-201ENST00000391149 SPDYE2BA6NHP3 402 aa8.27□□□□□ -1.09
RNU11-4P-201ENST00000391149 SPDYE6P0CI01 402 aa8.27□□□□□ -1.09
RNU11-4P-201ENST00000391149 PKD2Q13563 968 aa8.27□□□□□ -1.09
RNU11-4P-201ENST00000391149 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
RNU11-4P-201ENST00000391149 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
RNU11-4P-201ENST00000391149 SPOCK2Q92563 424 aa8.26□□□□□ -1.09
RNU11-4P-201ENST00000391149 KLHL34Q8N239 644 aa8.25□□□□□ -1.09
RNU11-4P-201ENST00000391149 DSG3P32926 999 aa8.24□□□□□ -1.09
RNU11-4P-201ENST00000391149 PABPN1Q86U42 306 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU11-4P-201ENST00000391149 SSUH2Q9Y2M2 353 aa8.22□□□□□ -1.09
RNU11-4P-201ENST00000391149 SCRIBQ14160 1630 aa8.21□□□□□ -1.1
RNU11-4P-201ENST00000391149 POTEDQ86YR6 584 aa8.18□□□□□ -1.1
RNU11-4P-201ENST00000391149 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
RNU11-4P-201ENST00000391149 HAP1P54257 671 aaPredicted RBP8.17□□□□□ -1.1
RNU11-4P-201ENST00000391149 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
RNU11-4P-201ENST00000391149 OSCARQ8IYS5 282 aa8.16□□□□□ -1.1
RNU11-4P-201ENST00000391149 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
RNU11-4P-201ENST00000391149 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
RNU11-4P-201ENST00000391149 BICRAQ9NZM4 1560 aa8.16□□□□□ -1.1
RNU11-4P-201ENST00000391149 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.16□□□□□ -1.1
RNU11-4P-201ENST00000391149 ECM2O94769 699 aaPredicted RBP8.15□□□□□ -1.1
RNU11-4P-201ENST00000391149 MIER1Q8N108 512 aa8.15□□□□□ -1.1
RNU11-4P-201ENST00000391149 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
RNU11-4P-201ENST00000391149 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
RNU11-4P-201ENST00000391149 BCANQ96GW7 911 aa8.08□□□□□ -1.12
RNU11-4P-201ENST00000391149 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
RNU11-4P-201ENST00000391149 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
RNU11-4P-201ENST00000391149 RGL2O15211 777 aa8.02□□□□□ -1.13
RNU11-4P-201ENST00000391149 NPM1P06748 294 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNU11-4P-201ENST00000391149 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
RNU11-4P-201ENST00000391149 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
RNU11-4P-201ENST00000391149 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms