Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AL139384.2-201ENST00000613809 3590 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AL391666.1-201ENST00000442570 2764 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC063976.2-201ENST00000425667 3556 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 DACH2-202ENST00000373131 2418 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 OR7E25P-202ENST00000641088 5937 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PLAGL1-203ENST00000367571 2800 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR412-201ENST00000362142 91 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP250-201ENST00000362534 119 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA1B-201ENST00000362535 133 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP263-201ENST00000363376 128 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD115-28-201ENST00000363931 81 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD14B-201ENST00000364533 90 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA73A-201ENST00000364938 206 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-637P-201ENST00000384050 107 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD116-13-201ENST00000384408 92 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR10A-201ENST00000385043 110 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA75.1-201ENST00000391130 148 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA48.6-201ENST00000391156 130 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 U3.32-201ENST00000408116 212 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR1296-201ENST00000408136 92 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 U3.34-201ENST00000408198 212 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP111-201ENST00000410349 271 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP229-201ENST00000410465 302 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PRYP1-201ENST00000412474 445 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS20P14-201ENST00000412545 360 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC007738.1-201ENST00000413892 348 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 PRYP2-201ENST00000416652 492 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 CYCSP48-201ENST00000417124 323 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 NME1P1-201ENST00000420914 382 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC012354.2-201ENST00000423051 461 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL36P2-201ENST00000426026 315 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AL161447.1-201ENST00000427811 230 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC152007.1-201ENST00000428521 224 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 KRT18P53-201ENST00000431919 117 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 HMGN2P31-201ENST00000432430 273 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AL139327.3-201ENST00000433721 379 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS10P3-201ENST00000439253 494 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AL035417.1-201ENST00000442754 214 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC006463.1-201ENST00000445929 232 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS29P28-201ENST00000446439 141 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AC090804.1-201ENST00000448870 490 ntBASIC1.57□□□□□ -2.16
KRTAP4-4Q9BYR3 AL162389.1-201ENST00000449233 177 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms