RNA–Protein interactions for RNA: ENST00000417124.1

CYCSP48-201, Transcript of cytochrome c, somatic pseudogene 48, humanhuman

BASIC

Gene CYCSP48, Length 323 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP48-201ENST00000417124 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
CYCSP48-201ENST00000417124 CHIC1Q5VXU3 224 aa11.04□□□□□ -0.64
CYCSP48-201ENST00000417124 PHF23Q9BUL5 403 aaPredicted RBP9.83□□□□□ -0.84
CYCSP48-201ENST00000417124 SENP3Q9H4L4 574 aaPredicted RBP9.31□□□□□ -0.92
CYCSP48-201ENST00000417124 PLPPR3Q6T4P5 718 aa9.02□□□□□ -0.97
CYCSP48-201ENST00000417124 FOXD1Q16676 465 aa8.73□□□□□ -1.01
CYCSP48-201ENST00000417124 ADRA2BP18089 450 aa8.64□□□□□ -1.03
CYCSP48-201ENST00000417124 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
CYCSP48-201ENST00000417124 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
CYCSP48-201ENST00000417124 KCNA4P22459 653 aa8.18□□□□□ -1.1
CYCSP48-201ENST00000417124 PPP4R3CPQ6ZMV5 832 aa8.05□□□□□ -1.12
CYCSP48-201ENST00000417124 EHMT2Q96KQ7 1210 aa7.92□□□□□ -1.14
CYCSP48-201ENST00000417124 MSH5O43196 834 aa7.82□□□□□ -1.16
CYCSP48-201ENST00000417124 NPM3O75607 178 aaKnown RBP7.81□□□□□ -1.16
CYCSP48-201ENST00000417124 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
CYCSP48-201ENST00000417124 NCBP3Q53F19 620 aaKnown RBP7.78□□□□□ -1.16
CYCSP48-201ENST00000417124 SLC4A1APQ9BWU0 796 aaKnown RBP7.76□□□□□ -1.17
CYCSP48-201ENST00000417124 CNKSR2Q8WXI2 1034 aa7.7□□□□□ -1.18
CYCSP48-201ENST00000417124 SCAF1Q9H7N4 1312 aaKnown RBP7.69□□□□□ -1.18
CYCSP48-201ENST00000417124 CSRNP3Q8WYN3 585 aa7.65□□□□□ -1.18
CYCSP48-201ENST00000417124 ZBTB22O15209 634 aa7.57□□□□□ -1.2
CYCSP48-201ENST00000417124 DMRT2Q9Y5R5 561 aa7.5□□□□□ -1.21
CYCSP48-201ENST00000417124 RNF216Q9NWF9 866 aaPredicted RBP7.48□□□□□ -1.21
CYCSP48-201ENST00000417124 HOXD11P31277 338 aaPredicted RBP7.41□□□□□ -1.22
CYCSP48-201ENST00000417124 FOXD4L1Q9NU39 408 aa7.36□□□□□ -1.23
CYCSP48-201ENST00000417124 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
CYCSP48-201ENST00000417124 DNAJC5BQ9UF47 199 aa7.32□□□□□ -1.24
CYCSP48-201ENST00000417124 DCAF8L1A6NGE4 600 aa7.28□□□□□ -1.24
CYCSP48-201ENST00000417124 MYCNP04198 464 aaPredicted RBP7.13□□□□□ -1.27
CYCSP48-201ENST00000417124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.11□□□□□ -1.27
CYCSP48-201ENST00000417124 ATF5Q9Y2D1 282 aaPredicted RBP7.09□□□□□ -1.27
CYCSP48-201ENST00000417124 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
CYCSP48-201ENST00000417124 ATXN8OSP0DMR3 200 aa6.98□□□□□ -1.29
CYCSP48-201ENST00000417124 POTEDQ86YR6 584 aa6.93□□□□□ -1.3
CYCSP48-201ENST00000417124 FKBP8Q14318 412 aa6.91□□□□□ -1.3
CYCSP48-201ENST00000417124 SAMD1Q6SPF0 538 aaPredicted RBP6.89□□□□□ -1.31
CYCSP48-201ENST00000417124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.86□□□□□ -1.31
CYCSP48-201ENST00000417124 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
CYCSP48-201ENST00000417124 SPINK5Q9NQ38 1064 aaPredicted RBP6.86□□□□□ -1.31
CYCSP48-201ENST00000417124 ZNF219Q9P2Y4 722 aaPredicted RBP6.83□□□□□ -1.32
CYCSP48-201ENST00000417124 TRHP20396 242 aaPredicted RBP6.81□□□□□ -1.32
CYCSP48-201ENST00000417124 RNF39Q9H2S5 420 aa6.79□□□□□ -1.32
CYCSP48-201ENST00000417124 CAPN15O75808 1086 aa6.75□□□□□ -1.33
CYCSP48-201ENST00000417124 MKRN4PQ13434 485 aaPredicted RBP6.74□□□□□ -1.33
CYCSP48-201ENST00000417124 ABCB7O75027 752 aa6.73□□□□□ -1.33
CYCSP48-201ENST00000417124 RTN4Q9NQC3 1192 aaKnown RBP6.73□□□□□ -1.33
CYCSP48-201ENST00000417124 POLA2Q14181 598 aa6.72□□□□□ -1.33
CYCSP48-201ENST00000417124 APLP2Q06481 763 aa6.7□□□□□ -1.34
CYCSP48-201ENST00000417124 C1QBPQ07021 282 aaKnown RBP6.65□□□□□ -1.34
CYCSP48-201ENST00000417124 SPDYE4A6NLX3 237 aa6.64□□□□□ -1.35
CYCSP48-201ENST00000417124 FBLN2P98095 1184 aa6.59□□□□□ -1.35
CYCSP48-201ENST00000417124 DSG3P32926 999 aa6.57□□□□□ -1.36
CYCSP48-201ENST00000417124 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
CYCSP48-201ENST00000417124 OSCARQ8IYS5 282 aa6.52□□□□□ -1.37
CYCSP48-201ENST00000417124 PROM2Q8N271 834 aa6.5□□□□□ -1.37
CYCSP48-201ENST00000417124 CACNB1Q02641 598 aaPredicted RBP6.49□□□□□ -1.37
CYCSP48-201ENST00000417124 VASPP50552 380 aaPredicted RBP6.46□□□□□ -1.38
CYCSP48-201ENST00000417124 FBXO3Q9UK99 471 aa6.45□□□□□ -1.38
CYCSP48-201ENST00000417124 ZBTB12Q9Y330 459 aaPredicted RBP6.45□□□□□ -1.38
CYCSP48-201ENST00000417124 IFNLR1Q8IU57 520 aaPredicted RBP6.44□□□□□ -1.38
CYCSP48-201ENST00000417124 ZNF692Q9BU19 519 aaPredicted RBP6.44□□□□□ -1.38
CYCSP48-201ENST00000417124 PABPN1Q86U42 306 aaKnown RBP eCLIP6.4□□□□□ -1.38
CYCSP48-201ENST00000417124 SSUH2Q9Y2M2 353 aa6.37□□□□□ -1.39
CYCSP48-201ENST00000417124 SLC24A1O60721 1099 aa6.36□□□□□ -1.39
CYCSP48-201ENST00000417124 SPDYE2BA6NHP3 402 aa6.35□□□□□ -1.39
CYCSP48-201ENST00000417124 SPDYE6P0CI01 402 aa6.35□□□□□ -1.39
CYCSP48-201ENST00000417124 SPDYE2Q495Y8 402 aa6.35□□□□□ -1.39
CYCSP48-201ENST00000417124 KLHL34Q8N239 644 aa6.31□□□□□ -1.4
CYCSP48-201ENST00000417124 DCAF8L2P0C7V8 631 aa6.3□□□□□ -1.4
CYCSP48-201ENST00000417124 PKD2Q13563 968 aa6.3□□□□□ -1.4
CYCSP48-201ENST00000417124 PLCD3Q8N3E9 789 aa6.29□□□□□ -1.4
CYCSP48-201ENST00000417124 MIER1Q8N108 512 aa6.28□□□□□ -1.4
CYCSP48-201ENST00000417124 SPOCK2Q92563 424 aa6.24□□□□□ -1.41
CYCSP48-201ENST00000417124 STAG3Q9UJ98 1225 aa6.23□□□□□ -1.41
CYCSP48-201ENST00000417124 CLEC11AQ9Y240 323 aa6.21□□□□□ -1.42
CYCSP48-201ENST00000417124 ECM2O94769 699 aaPredicted RBP6.2□□□□□ -1.42
CYCSP48-201ENST00000417124 RGL2O15211 777 aa6.18□□□□□ -1.42
CYCSP48-201ENST00000417124 CIZ1Q9ULV3 898 aaPredicted RBP6.18□□□□□ -1.42
CYCSP48-201ENST00000417124 NPM1P06748 294 aaKnown RBP eCLIP6.16□□□□□ -1.42
CYCSP48-201ENST00000417124 REM2Q8IYK8 340 aaPredicted RBP6.16□□□□□ -1.42
CYCSP48-201ENST00000417124 AKT1S1Q96B36 256 aa6.14□□□□□ -1.43
CYCSP48-201ENST00000417124 PLCB2Q00722 1185 aa6.13□□□□□ -1.43
CYCSP48-201ENST00000417124 RBM42Q9BTD8 480 aaKnown RBP6.13□□□□□ -1.43
CYCSP48-201ENST00000417124 SPDYE1Q8NFV5 336 aaPredicted RBP6.12□□□□□ -1.43
CYCSP48-201ENST00000417124 CREBZFQ9NS37 354 aa6.12□□□□□ -1.43
CYCSP48-201ENST00000417124 PITPNM1O00562 1244 aa6.11□□□□□ -1.43
CYCSP48-201ENST00000417124 PLEKHG5O94827 1062 aa6.11□□□□□ -1.43
CYCSP48-201ENST00000417124 PRR29P0C7W0 189 aa6.11□□□□□ -1.43
CYCSP48-201ENST00000417124 HAP1P54257 671 aaPredicted RBP6.11□□□□□ -1.43
CYCSP48-201ENST00000417124 NUBP1P53384 320 aa6.09□□□□□ -1.43
CYCSP48-201ENST00000417124 CHADLQ6NUI6 762 aa6.09□□□□□ -1.43
CYCSP48-201ENST00000417124 RNF25Q96BH1 459 aaPredicted RBP6.09□□□□□ -1.43
CYCSP48-201ENST00000417124 MNX1P50219 401 aaPredicted RBP6.08□□□□□ -1.44
CYCSP48-201ENST00000417124 DCAF8Q5TAQ9 597 aa6.07□□□□□ -1.44
CYCSP48-201ENST00000417124 CHGAP10645 457 aaKnown RBP6.06□□□□□ -1.44
CYCSP48-201ENST00000417124 RASEFQ8IZ41 740 aa6.06□□□□□ -1.44
CYCSP48-201ENST00000417124 CFAP44Q96MT7 982 aa6.06□□□□□ -1.44
CYCSP48-201ENST00000417124 ZBTB47Q9UFB7 747 aaPredicted RBP6.06□□□□□ -1.44
CYCSP48-201ENST00000417124 PAXIP1Q6ZW49 1069 aaPredicted RBP6.05□□□□□ -1.44
CYCSP48-201ENST00000417124 PYGBP11216 843 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms