Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.98□□□□□ -1.45
RFX1P22670 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 Y_RNA.146-201ENST00000363549 102 ntBASIC5.98□□□□□ -1.45
RFX1P22670 Y_RNA.197-201ENST00000364004 102 ntBASIC5.98□□□□□ -1.45
RFX1P22670 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RFX1P22670 RNU6-370P-201ENST00000411008 104 ntBASIC5.98□□□□□ -1.45
RFX1P22670 RNU6-1304P-201ENST00000411374 106 ntBASIC5.98□□□□□ -1.45
RFX1P22670 GPS2P1-201ENST00000411761 986 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AC245054.2-201ENST00000415639 319 ntBASIC5.98□□□□□ -1.45
RFX1P22670 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.98□□□□□ -1.45
RFX1P22670 AL591704.1-201ENST00000432574 275 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX1P22670 AC093815.1-201ENST00000508637 280 ntBASIC5.98□□□□□ -1.45
RFX1P22670 RNU4-60P-201ENST00000517239 135 ntBASIC5.98□□□□□ -1.45
RFX1P22670 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX1P22670 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX1P22670 AC090115.3-201ENST00000553218 849 ntBASIC5.98□□□□□ -1.45
RFX1P22670 MIR3941-201ENST00000582572 103 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.98□□□□□ -1.45
RFX1P22670 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.98□□□□□ -1.45
RFX1P22670 DUSP12P1-201ENST00000612874 516 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AL359547.2-201ENST00000615810 418 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AC008121.3-201ENST00000618726 433 ntBASIC5.98□□□□□ -1.45
RFX1P22670 OR52H1-202ENST00000641796 1061 ntBASIC5.98□□□□□ -1.45
RFX1P22670 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RFX1P22670 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RFX1P22670 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 SRRM1P3-201ENST00000426911 2678 ntBASIC5.98□□□□□ -1.45
RFX1P22670 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.98□□□□□ -1.45
RFX1P22670 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFX1P22670 AC025031.4-201ENST00000621248 3271 ntBASIC5.98□□□□□ -1.45
RFX1P22670 AC068870.1-201ENST00000563737 2455 ntBASIC5.98□□□□□ -1.45
RFX1P22670 IRF5P1-201ENST00000504852 2164 ntBASIC5.97□□□□□ -1.45
RFX1P22670 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX1P22670 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.97□□□□□ -1.45
RFX1P22670 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.97□□□□□ -1.45
RFX1P22670 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RFX1P22670 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX1P22670 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFX1P22670 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RFX1P22670 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX1P22670 RPL32P3-201ENST00000359025 275 ntBASIC5.97□□□□□ -1.45
RFX1P22670 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFX1P22670 SNORD116-11-201ENST00000383882 92 ntBASIC5.97□□□□□ -1.45
RFX1P22670 MIR551A-201ENST00000385042 96 ntBASIC5.97□□□□□ -1.45
RFX1P22670 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.97□□□□□ -1.45
RFX1P22670 ATG3P1-201ENST00000419507 911 ntBASIC5.97□□□□□ -1.45
RFX1P22670 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.97□□□□□ -1.45
RFX1P22670 RPL7L1P9-201ENST00000431298 745 ntBASIC5.97□□□□□ -1.45
RFX1P22670 AL161722.2-201ENST00000434731 981 ntBASIC5.97□□□□□ -1.45
RFX1P22670 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 HMGB3P22-202ENST00000451823 572 ntBASIC5.97□□□□□ -1.45
RFX1P22670 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.97□□□□□ -1.45
RFX1P22670 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 RPL7AP6-201ENST00000477943 801 ntBASIC5.97□□□□□ -1.45
RFX1P22670 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.97□□□□□ -1.45
RFX1P22670 AC079140.5-201ENST00000507882 310 ntBASIC5.97□□□□□ -1.45
RFX1P22670 AC093303.1-201ENST00000514549 295 ntBASIC5.97□□□□□ -1.45
RFX1P22670 RNU6-123P-201ENST00000516163 102 ntBASIC5.97□□□□□ -1.45
RFX1P22670 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.97□□□□□ -1.45
RFX1P22670 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.97□□□□□ -1.45
RFX1P22670 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RFX1P22670 AC135068.12-201ENST00000637370 931 ntBASIC5.97□□□□□ -1.45
RFX1P22670 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RFX1P22670 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 AC004817.4-201ENST00000602396 3625 ntBASIC5.97□□□□□ -1.45
RFX1P22670 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
RFX1P22670 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RFX1P22670 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.45
RFX1P22670 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
RFX1P22670 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RFX1P22670 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms