RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
HMGB3P22-202ENST00000451823 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
HMGB3P22-202ENST00000451823 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
HMGB3P22-202ENST00000451823 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
HMGB3P22-202ENST00000451823 FOXD1Q16676 465 aa15.85■□□□□ 0.13
HMGB3P22-202ENST00000451823 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
HMGB3P22-202ENST00000451823 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
HMGB3P22-202ENST00000451823 ADRA2BP18089 450 aa14.88□□□□□ -0.03
HMGB3P22-202ENST00000451823 PIAS4Q8N2W9 510 aaPredicted RBP14.8□□□□□ -0.04
HMGB3P22-202ENST00000451823 MSH5O43196 834 aa14.75□□□□□ -0.05
HMGB3P22-202ENST00000451823 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
HMGB3P22-202ENST00000451823 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
HMGB3P22-202ENST00000451823 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
HMGB3P22-202ENST00000451823 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
HMGB3P22-202ENST00000451823 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
HMGB3P22-202ENST00000451823 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
HMGB3P22-202ENST00000451823 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
HMGB3P22-202ENST00000451823 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
HMGB3P22-202ENST00000451823 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
HMGB3P22-202ENST00000451823 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
HMGB3P22-202ENST00000451823 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
HMGB3P22-202ENST00000451823 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
HMGB3P22-202ENST00000451823 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
HMGB3P22-202ENST00000451823 KCNA4P22459 653 aa12.49□□□□□ -0.41
HMGB3P22-202ENST00000451823 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
HMGB3P22-202ENST00000451823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGB3P22-202ENST00000451823 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
HMGB3P22-202ENST00000451823 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
HMGB3P22-202ENST00000451823 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
HMGB3P22-202ENST00000451823 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
HMGB3P22-202ENST00000451823 CAPN15O75808 1086 aa11.97□□□□□ -0.49
HMGB3P22-202ENST00000451823 DSG3P32926 999 aa11.85□□□□□ -0.51
HMGB3P22-202ENST00000451823 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
HMGB3P22-202ENST00000451823 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
HMGB3P22-202ENST00000451823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
HMGB3P22-202ENST00000451823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
HMGB3P22-202ENST00000451823 APLP2Q06481 763 aa11.77□□□□□ -0.53
HMGB3P22-202ENST00000451823 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
HMGB3P22-202ENST00000451823 ABCB7O75027 752 aa11.7□□□□□ -0.54
HMGB3P22-202ENST00000451823 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
HMGB3P22-202ENST00000451823 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
HMGB3P22-202ENST00000451823 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
HMGB3P22-202ENST00000451823 POLA2Q14181 598 aa11.52□□□□□ -0.57
HMGB3P22-202ENST00000451823 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
HMGB3P22-202ENST00000451823 ZBTB22O15209 634 aa11.47□□□□□ -0.57
HMGB3P22-202ENST00000451823 POTEHQ6S545 545 aa11.25□□□□□ -0.61
HMGB3P22-202ENST00000451823 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
HMGB3P22-202ENST00000451823 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
HMGB3P22-202ENST00000451823 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
HMGB3P22-202ENST00000451823 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
HMGB3P22-202ENST00000451823 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
HMGB3P22-202ENST00000451823 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
HMGB3P22-202ENST00000451823 CHRDL2Q6WN34 429 aa11.02□□□□□ -0.65
HMGB3P22-202ENST00000451823 FBLN2P98095 1184 aa10.98□□□□□ -0.65
HMGB3P22-202ENST00000451823 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
HMGB3P22-202ENST00000451823 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
HMGB3P22-202ENST00000451823 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
HMGB3P22-202ENST00000451823 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
HMGB3P22-202ENST00000451823 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
HMGB3P22-202ENST00000451823 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
HMGB3P22-202ENST00000451823 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
HMGB3P22-202ENST00000451823 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
HMGB3P22-202ENST00000451823 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
HMGB3P22-202ENST00000451823 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
HMGB3P22-202ENST00000451823 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
HMGB3P22-202ENST00000451823 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
HMGB3P22-202ENST00000451823 SPDYE1Q8NFV5 336 aaPredicted RBP10.67□□□□□ -0.7
HMGB3P22-202ENST00000451823 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGB3P22-202ENST00000451823 HAX1O00165 279 aa10.63□□□□□ -0.71
HMGB3P22-202ENST00000451823 PRKAR2AP13861 404 aaKnown RBP10.58□□□□□ -0.72
HMGB3P22-202ENST00000451823 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
HMGB3P22-202ENST00000451823 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
HMGB3P22-202ENST00000451823 EVX2Q03828 476 aa10.51□□□□□ -0.73
HMGB3P22-202ENST00000451823 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
HMGB3P22-202ENST00000451823 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
HMGB3P22-202ENST00000451823 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
HMGB3P22-202ENST00000451823 STAG3Q9UJ98 1225 aa10.34□□□□□ -0.75
HMGB3P22-202ENST00000451823 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
HMGB3P22-202ENST00000451823 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
HMGB3P22-202ENST00000451823 GABBR2O75899 941 aa10.25□□□□□ -0.77
HMGB3P22-202ENST00000451823 CD44P16070 742 aaKnown RBP10.23□□□□□ -0.77
HMGB3P22-202ENST00000451823 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
HMGB3P22-202ENST00000451823 PROM2Q8N271 834 aa10.12□□□□□ -0.79
HMGB3P22-202ENST00000451823 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGB3P22-202ENST00000451823 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
HMGB3P22-202ENST00000451823 CLCN6P51797 869 aa10.04□□□□□ -0.8
HMGB3P22-202ENST00000451823 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
HMGB3P22-202ENST00000451823 MIER1Q8N108 512 aa10.03□□□□□ -0.8
HMGB3P22-202ENST00000451823 PAK3O75914 559 aaPredicted RBP10.02□□□□□ -0.81
HMGB3P22-202ENST00000451823 ZNF579Q8NAF0 562 aaKnown RBP10.02□□□□□ -0.81
HMGB3P22-202ENST00000451823 FKBP8Q14318 412 aa10.01□□□□□ -0.81
HMGB3P22-202ENST00000451823 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
HMGB3P22-202ENST00000451823 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
HMGB3P22-202ENST00000451823 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P22-202ENST00000451823 LHX8Q68G74 356 aa9.95□□□□□ -0.82
HMGB3P22-202ENST00000451823 TSPYL2Q9H2G4 693 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P22-202ENST00000451823 PLEKHG5O94827 1062 aa9.94□□□□□ -0.82
HMGB3P22-202ENST00000451823 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
HMGB3P22-202ENST00000451823 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
HMGB3P22-202ENST00000451823 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms