RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
LRRC39-201ENST00000342895 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
LRRC39-201ENST00000342895 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
LRRC39-201ENST00000342895 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
LRRC39-201ENST00000342895 SENP3Q9H4L4 574 aaPredicted RBP14.78□□□□□ -0.04
LRRC39-201ENST00000342895 MSH5O43196 834 aa13.87□□□□□ -0.19
LRRC39-201ENST00000342895 FOXD1Q16676 465 aa13.7□□□□□ -0.22
LRRC39-201ENST00000342895 POTEHQ6S545 545 aa13.7□□□□□ -0.22
LRRC39-201ENST00000342895 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
LRRC39-201ENST00000342895 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
LRRC39-201ENST00000342895 PPP6R1Q9UPN7 881 aa13.08□□□□□ -0.32
LRRC39-201ENST00000342895 ADRA2BP18089 450 aa13.05□□□□□ -0.32
LRRC39-201ENST00000342895 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
LRRC39-201ENST00000342895 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
LRRC39-201ENST00000342895 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
LRRC39-201ENST00000342895 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
LRRC39-201ENST00000342895 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
LRRC39-201ENST00000342895 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
LRRC39-201ENST00000342895 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
LRRC39-201ENST00000342895 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
LRRC39-201ENST00000342895 KCNA4P22459 653 aa11.61□□□□□ -0.55
LRRC39-201ENST00000342895 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
LRRC39-201ENST00000342895 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
LRRC39-201ENST00000342895 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
LRRC39-201ENST00000342895 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
LRRC39-201ENST00000342895 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
LRRC39-201ENST00000342895 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
LRRC39-201ENST00000342895 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
LRRC39-201ENST00000342895 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
LRRC39-201ENST00000342895 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
LRRC39-201ENST00000342895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
LRRC39-201ENST00000342895 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
LRRC39-201ENST00000342895 LHX8Q68G74 356 aa10.76□□□□□ -0.69
LRRC39-201ENST00000342895 FOXD4L1Q9NU39 408 aa10.76□□□□□ -0.69
LRRC39-201ENST00000342895 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
LRRC39-201ENST00000342895 ZBTB22O15209 634 aa10.68□□□□□ -0.7
LRRC39-201ENST00000342895 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
LRRC39-201ENST00000342895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
LRRC39-201ENST00000342895 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
LRRC39-201ENST00000342895 SAMD1Q6SPF0 538 aaPredicted RBP10.58□□□□□ -0.72
LRRC39-201ENST00000342895 APLP2Q06481 763 aa10.57□□□□□ -0.72
LRRC39-201ENST00000342895 CSRNP3Q8WYN3 585 aa10.56□□□□□ -0.72
LRRC39-201ENST00000342895 EHMT2Q96KQ7 1210 aa10.56□□□□□ -0.72
LRRC39-201ENST00000342895 PCDH10Q9P2E7 1040 aa10.52□□□□□ -0.73
LRRC39-201ENST00000342895 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
LRRC39-201ENST00000342895 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
LRRC39-201ENST00000342895 CAPN15O75808 1086 aa10.41□□□□□ -0.74
LRRC39-201ENST00000342895 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.75
LRRC39-201ENST00000342895 TRHP20396 242 aaPredicted RBP10.32□□□□□ -0.76
LRRC39-201ENST00000342895 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
LRRC39-201ENST00000342895 DSG3P32926 999 aa10.3□□□□□ -0.76
LRRC39-201ENST00000342895 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
LRRC39-201ENST00000342895 POTEMA6NI47 508 aa10.26□□□□□ -0.77
LRRC39-201ENST00000342895 ABCB7O75027 752 aa10.18□□□□□ -0.78
LRRC39-201ENST00000342895 POLA2Q14181 598 aa10.17□□□□□ -0.78
LRRC39-201ENST00000342895 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
LRRC39-201ENST00000342895 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
LRRC39-201ENST00000342895 HAX1O00165 279 aa10□□□□□ -0.81
LRRC39-201ENST00000342895 FBLN2P98095 1184 aa9.95□□□□□ -0.82
LRRC39-201ENST00000342895 MKRN4PQ13434 485 aaPredicted RBP9.89□□□□□ -0.83
LRRC39-201ENST00000342895 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
LRRC39-201ENST00000342895 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
LRRC39-201ENST00000342895 SPDYE2BA6NHP3 402 aa9.76□□□□□ -0.85
LRRC39-201ENST00000342895 SPDYE6P0CI01 402 aa9.76□□□□□ -0.85
LRRC39-201ENST00000342895 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
LRRC39-201ENST00000342895 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
LRRC39-201ENST00000342895 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
LRRC39-201ENST00000342895 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
LRRC39-201ENST00000342895 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
LRRC39-201ENST00000342895 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
LRRC39-201ENST00000342895 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRRC39-201ENST00000342895 EVX2Q03828 476 aa9.53□□□□□ -0.88
LRRC39-201ENST00000342895 FKBP8Q14318 412 aa9.52□□□□□ -0.89
LRRC39-201ENST00000342895 PROM2Q8N271 834 aa9.52□□□□□ -0.89
LRRC39-201ENST00000342895 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
LRRC39-201ENST00000342895 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
LRRC39-201ENST00000342895 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
LRRC39-201ENST00000342895 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
LRRC39-201ENST00000342895 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
LRRC39-201ENST00000342895 FXR2P51116 673 aaKnown RBP eCLIP9.34□□□□□ -0.91
LRRC39-201ENST00000342895 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
LRRC39-201ENST00000342895 GABBR2O75899 941 aa9.31□□□□□ -0.92
LRRC39-201ENST00000342895 FBXO3Q9UK99 471 aa9.28□□□□□ -0.92
LRRC39-201ENST00000342895 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
LRRC39-201ENST00000342895 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.93
LRRC39-201ENST00000342895 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
LRRC39-201ENST00000342895 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
LRRC39-201ENST00000342895 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
LRRC39-201ENST00000342895 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
LRRC39-201ENST00000342895 MIER1Q8N108 512 aa9.13□□□□□ -0.95
LRRC39-201ENST00000342895 VASPP50552 380 aaPredicted RBP9.12□□□□□ -0.95
LRRC39-201ENST00000342895 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
LRRC39-201ENST00000342895 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
LRRC39-201ENST00000342895 MNX1P50219 401 aaPredicted RBP9.1□□□□□ -0.95
LRRC39-201ENST00000342895 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
LRRC39-201ENST00000342895 ZBTB47Q9UFB7 747 aaPredicted RBP9.07□□□□□ -0.96
LRRC39-201ENST00000342895 NPM1P06748 294 aaKnown RBP eCLIP9.06□□□□□ -0.96
LRRC39-201ENST00000342895 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
LRRC39-201ENST00000342895 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
LRRC39-201ENST00000342895 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms